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Job DescriptionP52037
Confidence99.96%DateThu Jan 5 12:04:56 GMT 2012
Rank167Aligned Residues230
% Identity22%Templatec3kvoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30...... ...40.........50.........60.........70.....
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Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL. . . . . . HAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQ
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Template Sequence  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK
Template Known Secondary structure 
T
SSTTT
S
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T


TT
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   76...80.........90.........100.........110.........120.........130.........140......... 150....
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Query Sequence  HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGS. PGEYV
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Template Sequence  KFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACI. . . . PYLKKSKVAHILNISPPLNLNPVWFKQHC
Template Known Secondary structure  S











TTTS
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   91........100.........110.........120.........130....... ..140.........150.........160......
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  DYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKAS
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Template Sequence  AYTIAKYGMSMYVLGMAEEFKG. EIAVNALWPKTAIHTAAM. . . . . . . . DMLGGPGIESQCRKVDIIADAA. YSIFQKPK
Template Known Secondary structure  TTT.T

SB
B

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TTGGGG
B
.TS
T
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   167..170.........180........ .190.........200...... ...210.........220........ .230......
 
   235....240......
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Query Sequence  YVTGSFIDLAGG
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Template Sequence  SFTGNFV. IDEN
Template Known Secondary structure  T

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   237..240... ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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