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Job DescriptionP52037
Confidence97.93%DateThu Jan 5 12:04:56 GMT 2012
Rank284Aligned Residues201
% Identity12%Templatec3iusB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a functionally unknown conserved protein2 from silicibacter pomeroyi dss
Resolution1.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
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Template Sequence  GTLLSFGH. GYTARVLSRALAPQGWRIIGTSRNPDQXEAIR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ASGAEPL
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T
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GGGT
S
GGG................................TTS
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   3......10 .........20.........30.........40.. .......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKG
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Template Sequence  LWPGEEPSLDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRV
Template Known Secondary structure  TTTS



TT





BTTB
TGGG
SGGGS


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   50.........60.........70.........80.........90.........100.........110.........120.........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFI
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Template Sequence  XAEQQWQAVP. . . . . . NLPLHVFRLAGI. . . YGPGRGPFGGIRRIIKPGQVFSRIHVEDIAQVLAAS. . . XARPDPGAVY
Template Known Secondary structure  TST......T


...BTTBS






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   130......... 140.........150. ........160.........170.........180....... ..190.......
 
   242.....
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Query Sequence  DLAGGK
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Template Sequence  NVCDDE
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S
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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