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Job DescriptionP52037
Confidence100.00%DateThu Jan 5 12:04:56 GMT 2012
Rank124Aligned Residues226
% Identity17%Templatec3i1jB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase, short chain PDBTitle: structure of a putative short chain dehydrogenase from2 pseudomonas syringae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
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Template Sequence  RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKG
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Template Sequence  LDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSSVG. . RKGRANWGAYGVSKF
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   94.....100.........110.........120.........130.........140.........150...... ...160.........170.
 
   162.......170.... .....180.........190.........200.........210.........220.........230.........240
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Query Sequence  AIDTLTTGLSLEV. AAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSF
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Template Sequence  ATEGLXQTLADELEGVTAVRANSINPGATRTGXRAAY. . . . . . . . . . . . NPLNNPA. PEDIXPVYLYLXGPDSTGINGQA
Template Known Secondary structure  TTTSS

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.GGGGSGGGTT

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   172.......180.........190.........200........ .210..... ....220.........230........
 
   241.
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Query Sequence  ID
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Template Sequence  LN
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   243.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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