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Job DescriptionP52037
Confidence98.43%DateThu Jan 5 12:04:56 GMT 2012
Rank251Aligned Residues170
% Identity13%Templatec3ew7A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:lmo0794 protein; PDBTitle: crystal structure of the lmo0794 protein from listeria2 monocytogenes. northeast structural genomics consortium3 target lmr162.
Resolution2.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  ALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAAL
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Template Sequence  IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDI
Template Known Secondary structure  TTTSTT
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   3......10.........20.........30.........40. ...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  VNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKGAI
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Template Sequence  NILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAAAPYYP. . . . TARAQAKQLE
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   45....50.........60.........70.........80.........90.........100.........110 .........120
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  DTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFIDL
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Template Sequence  HLKSHQ. . . . . . . AEFSWTYISPSAXFEP. . . . . . . . . . . . . . . . . . . . . GFISXEDYAIAVLDEIERPNHL. . NEHFTV
Template Known Secondary structure  TTT.......TTS

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   140..... ....150.........160. ........170.........180... ......
 
   244.
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Query Sequence  AG
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Template Sequence  AG
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   211.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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