Job Description P52037 Confidence 99.25% Date Thu Jan 5 12:04:56 GMT 2012 Rank 210 Aligned Residues 207 % Identity 15% Template c3ay3C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of glucuronic acid dehydrogeanse from2 chromohalobacter salexigens Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	I	A	L	V	T	G	G	S	R	G	I	G	R	A	T	A	L	L	L	A	Q	E	G	Y	T	V	A	V	N	Y	Q	Q	N	L	H	A	A	Q	E	V	M	N	L	I	T	Q	A	G	G	K	A	F	V	L	Q	A	D	I	S	D	E	N	Q	V	V	A	M	F	T	A	I	D	Q	H	D	E	P	L
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		L	N	R	L	L	V	T	G	A	A	G	G	V	G	S	A	I	R	P	H	L	G	T	L	A	H	E	V	R	L	S	D	I	V	D	L	.	.	.	.	.	.	.	.	.	.	G	A	A	E	A	H	E	E	I	V	A	C	D	L	A	D	A	Q	A	V	H	D	L	V	K	D	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	T	S							G	G	G	G	G	G	G									S	S			.	.	.	.	.	.	.	.	.	.					T	T								T	T										T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	V	N	N	A	G	I	L	F	T	Q	C	T	V	E	N	L	T	A	E	R	I	N	R	V	L	S	T	N	V	T	G	Y	F	L	C	C	R	E	A	V	K	R	M	A	L	K	N	G	G	S	G	G	A	I	V	N	V	S	S	V	A	S	R	L	G	S	P	G	E	Y	V	D	Y	A	A	S	K
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	C	D	G	I	I	H	L	G	G	V	S	V	E	R	P	W	N	D	I	L	Q	A	N	I	I	G	A	Y	N	L	Y	E	A	A	R	N	L	G	K	P	R	I	V	F	A	S	S	N	H	T	I	G	Y	Y	P	R	T	T	R	I	D	T	E	V	P	R	R	P	D	S	L	Y	G	L	S	K
Template Known Secondary structure		.	.	.	.		S							S			S											T														T	T										G	G	G	S	T	T	S	B	T	T	S				T	T	S						S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	D	T	L	T	T	G	L	S	L	E	V	A	A	Q	G	I	R	V	N	C	V	R	P	G	F	I	Y	T	E	M	H	A	S	G	G	E	P	G	R	V	D	R	V	K	S	N	I	P	M	Q	R	G	G	Q	A	E	E	V	A	Q	A	I	V	W	L	L	S	D	K	A	S	Y	V	T	G	S	F
Query Conservation
Alig confidence																.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		C	F	G	E	D	L	A	S	L	Y	Y	H	K	F	.	.	.	D	I	E	T	L	N	I	R	I	G	S	C	F	P	K	P	K	D	A	R	M	M	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	W	L	S	V	D	D	F	M	R	L	M	K	R	A	F	.	.	V	A	P	K	L	G	C	T	V
Template Known Secondary structure														T	T	.	.	.											B		S	S	S			S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	B															.	.			S
Template Predicted Secondary structure																.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.														.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.
		241	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	L	A	G	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	G	A	S	A	N
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions