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Job DescriptionP52037
Confidence100.00%DateThu Jan 5 12:04:56 GMT 2012
Rank51Aligned Residues235
% Identity29%Templatec2pd6D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:estradiol 17-beta-dehydrogenase 8; PDBTitle: structure of human hydroxysteroid dehydrogenase type 8, hsd17b8
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
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Template Sequence  ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL. . . . . . NHAAFQADVSEARAARCLLEQVQACFSRPP
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TTTSTT
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   12.......20.........30.........40.........50..... ....60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKG
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Template Sequence  SVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC. . . RGSIINISSIVGKVGNVGQTNYAASKA
Template Known Secondary structure  S








GGG

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   98.100.........110.........120.........130.........140....... ..150.........160.........170....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFI
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Template Sequence  GVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV. PQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSV
Template Known Secondary structure  GGGT
SB
STTTTTS.
T
TT
S
B
SGGGTT

S
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   175....180.........190.........200.........210 .........220.........230.........240.........250...
 
   242....
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Query Sequence  DLAGG
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Template Sequence  EVTGG
Template Known Secondary structure  STT
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   254....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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