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Job DescriptionP52037
Confidence100.00%DateThu Jan 5 12:04:56 GMT 2012
Rank134Aligned Residues234
% Identity27%Templatec2jahB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:clavulanic acid dehydrogenase; PDBTitle: biochemical and structural analysis of the clavulanic acid2 dehydeogenase (cad) from streptomyces clavuligerus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
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Template Sequence  KVALITGASSGIGEATARALAAEGAAVAIAAR. RVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLD
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STTSTT
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   8.10.........20.........30......... 40.........50.........60.........70.........80......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKG
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Template Sequence  ILVNNAGI. . . . . . XLLGPVEDADTTDWTRXIDTNLLGLXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKF
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STT

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   87..90.... .....100.........110.........120.........130.........140.........150.........160
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFI
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Template Sequence  GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQDIAEAVRYAVT. APHHATVHEI
Template Known Secondary structure  GGGT

SB
SSGGGG


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   161........170.........180.........190.........200.........210.........220......... 230.........
 
   242.
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Query Sequence  DL
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Template Sequence  FI
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   240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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