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Job DescriptionP52037
Confidence100.00%DateThu Jan 5 12:04:56 GMT 2012
Rank114Aligned Residues215
% Identity28%Templatec2hq1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: crystal structure of orf 1438 a putative glucose/ribitol2 dehydrogenase from clostridium thermocellum
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
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Template Sequence  KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID
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SS
SSTT

TT
STT

S
TTSS


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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKG
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Template Sequence  ILVNNA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . WDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSQANYAASKA
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TT



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   86...90. ........100.........110.........120.........130......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFI
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Template Sequence  GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL. PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVI
Template Known Secondary structure  GGGT
SB

TS.
TTSTTSS
B
SGGGTT

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   161........170.........180.........190...... ...200.........210.........220.........230.........
 
   242....
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Query Sequence  DLAGG
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Template Sequence  NIDGG
Template Known Secondary structure  STT
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   240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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