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Job DescriptionP52037
Confidence100.00%DateThu Jan 5 12:04:56 GMT 2012
Rank20Aligned Residues241
% Identity28%Templatec1w4zA_
PDB info PDB header:antibiotic biosynthesisChain: A: PDB Molecule:ketoacyl reductase; PDBTitle: structure of actinorhodin polyketide (actiii) reductase
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
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Template Sequence  EVALVTGATSGIGLEIARRLGKEGLRVFVCAR. GEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD
Template Known Secondary structure 
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SSTT
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   7..10.........20.........30........ .40.........50.........60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKG
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Template Sequence  VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG. . . TGRIVNIASTGGKQGVVHAAPYSASKH
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GGG

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   86...90.........100.........110.........120.........130..... ....140.........150.........160..
 
   162.......170.........180.........190..... ....200.........210.........220.........230.
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Query Sequence  AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA. . . . . . . . . . SGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSD
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Template Sequence  GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGP
Template Known Secondary structure  GGGT
SB
STT

TTSTTSS
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   232.......240......
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Query Sequence  KASYVTGSFIDLAGG
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Template Sequence  GAAAVTAQALNVCGG
Template Known Secondary structure  GGTT

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   243......250.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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