|   |
6 | . | . | . | 10 | . | . | . | . | |
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | L | A | T | A | L | Q | T | . |
V | P | E | Q | N | I | D | V | T | N | S | E | N | A | L | I | I | K | M | N | D | Y | G | D | L | Q | I | N | I | L | F | T | S | R | Q | M | I | I | E | T | F | I | C | P | V | S | S | I | S | N | P | D | E | F | N | T | F | L | L | R | N | Q | K | M | M | P | L | S | S | V |
Query Conservation |   |
  |
|
|   |   |
|
|   |   | . |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |
|
|
|
|   |
|   |
|   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |   |
|
|   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|   |
|   |   |
|   | . |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |   | . |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|
Template Sequence |   |
Q | A | H | Q | D | I | I | A | N | I | G | E | K | L | G | L | P | L | T | F | D | D | N | N | Q | C | L | L | L | L | D | S | . |
D | I | F | T | S | I | E | A | K | D | D | I | W | L | L | N | G | M | I | I | P | L | S | P | V | C | . |
G | D | S | I | W | R | Q | I | M | V | I | N | G | E | L | A | A | N | N | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|
|
| T | T | S |  |  |  |  |  |  | T | T | . | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | S | S | V | Q | Q | E | E | Y | Y | I | V | F | G | . |
A | L | S | L | K | S | S | L | E | D | I | L | L | E | I | T | S | L | V | D | N | A | L | D | L | A | E | I | T | E | E | Y | S | H |
Query Conservation |   |
|
|   |   |
|   |
|   |
|
|
|   |   |
|
| . |
|
|
|   |   |
|   |
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|   |
|   |   |   |
Template Sequence |   |
G | T | L | A | Y | I | D | A | A | E | T | L | L | L | I | H | A | I | T | D | L | T | N | T | Y | H | I | I | S | Q | L | E | S | F | V | N | Q | Q | E | A | L | K | N | I | L | Q | E | Y | A | K |
Template Known Secondary structure |   |
|  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |