Job Description P0CF90 Confidence 87.69% Date Thu Jan 5 11:31:49 GMT 2012 Rank 191 Aligned Residues 64 % Identity 27% Template c2l0kA_ PDB info PDB header:transcription Chain: A: PDB Molecule:stage iii sporulation protein d; PDBTitle: nmr solution structure of a transcription factor spoiiid in complex2 with dna Resolution UNK

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		62	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		S	E	R	.	.	E	E	I	R	A	G	L	S	A	K	M	S	I	R	A	I	A	T	A	L	N	R	S	P	S	T	I	S	R	E	V	Q	R	N	R	G	R	R	Y	Y	K	A	V	D	A	N	N	R	A	N	R	M	A	K	R	P	K	P	C	L	L	D	Q	N	L	P	L	R	K	L	V	L	E	K	L
Query Conservation					.	.
Alig confidence					.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	R	T	I	K	I	G	K	Y	I	V	E	T	K	K	T	V	R	V	I	A	K	E	F	G	V	S	K	S	T	V	H	K	D	L	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	P	E	I	N	P	D	L	A	N	E	V	K	E	I	L
Template Known Secondary structure																											T	S										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	K	W	S	P	E	Q	I	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	H	K	S	I	R	H	L	R	G
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions