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Job DescriptionP00363
Confidence100.00%DateThu Jan 5 10:56:34 GMT 2012
Rank21Aligned Residues309
% Identity39%Templated2bs2a2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQ. . . . . DHDSFEYHFHDTVAGGD
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Template Sequence  MKVQYCDSLVIGGGLAGLRAAVATQQKG. . LSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSD
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S

STTT..


SS
GGGSGGGG

S





SGGGTT

TT
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   1........10.........20........ .30.........40.........50.........60.........70........
 
   76...80.........90.........100...... ...110.........120.........130....
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Query Sequence  WLCEQDVVDYFVHHCPTEMTQLELWGCPWSR. . . . . . . . . . . . . . . . . . . . . RPDGSVNVRRFGGMKIERTWFAADKTGF
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Template Sequence  WGCDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGH
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GGGTTSB

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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  HMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGM
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Template Sequence  TMLFAVANECLKL. GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGT
Template Known Secondary structure  .T

STTTTT


S




GGGSSS
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TT
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   159160.........170. ........180.........190.........200.........210.........220.........230.......
 
   215....220.........230.........240.........250.........260.........270.........280.........290....
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Query Sequence  GMALSHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQA
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Template Sequence  AIALET. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT..........................................................................
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   238.240...
 
   295....300.........310.........320.........330.........340.........350.........360.........370....
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Query Sequence  FWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIAQLGNMGGIRTDYRGEAKLKG
Template Known Secondary structure  .........................................................SSS





TTSB
SSBT
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   375....380.........390.........400.........410.........420..... ....430.........440...
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Query Sequence  LFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGNGNEAA. IEAQAAGVEQRLKDLVNQ
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Template Sequence  LFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEKFVKGQEAYMKSLVES
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GGG

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   388.390.........400.........410.........420.........430.........440.........450.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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