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Job DescriptionP00363
Confidence100.00%DateThu Jan 5 10:56:34 GMT 2012
Rank24Aligned Residues281
% Identity34%Templated1d4ca2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50....... ..60.........70.......
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Query Sequence  QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVA. . . . . . . QDHDSFEYHFHDTVAGGDWL
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Template Sequence  TTDVVIIGSGGAGLAAAVSARDAG. . AKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI
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S
SSTTT..


SSSSS
TTGGG

S

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TTT
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   125....130.........140........ .150.........160.........170.........180.........190.........200..
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  CEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHF
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Template Sequence  NDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGG. . . . . . ASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSR
Template Known Secondary structure  S
TTT





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STTT

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   203......210.........220.........230....... ..240.........250.........260.........270......
 
   158.160.........170.........180.........190.........200.. .......210.........220.....
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Query Sequence  VLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRY. . . . . . . . . . . . NTNGGIVTGDGMGMALSHGVPLR
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Template Sequence  VVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDVALQAGAATR
Template Known Secondary structure 

SSS


TTT
S




TT

GGGTT



S
TT
SSTTB
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   277..280.........290.........300.........310.........320.........330.........340.........350......
 
   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  DMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTI
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Template Sequence  DLEMG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   357..360.
 
   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  STPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLVIDTKAEVKSEKTGKPITGLYAAGEVTG. G
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TT
BTTTSS
GGGB
.S
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   508.510.........520.........530....... .
 
   386...390.........400.........410.......
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Query Sequence  LHGANRLGSNSLAELVVFGRLAGEQATERAAT
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Template Sequence  VHGANRLGGNAISDIVTYGRIAGASAAKFAKD
Template Known Secondary structure  SSTTS

TT
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   539540.........550.........560.........570
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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