Job Description P00363 Confidence 98.54% Date Thu Jan 5 10:56:34 GMT 2012 Rank 253 Aligned Residues 160 % Identity 14% Template d1c0pa1 SCOP info Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain Resolution 1.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	T	F	Q	A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	W	L	C	E	Q
Query Conservation
Alig confidence																														.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	M	H	S	Q	K	R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	K	G	.	.	Y	S	V	H	I	L	A	R	D	L	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	T	D	G
Template Known Secondary structure						S									S													T	T	.	.								S	S		T	T		T	T		T	T	S	S	G	G	G				B					S	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																														.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.			.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.														1060	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	.	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T
Query Conservation																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	R	Q	A	K	W	E	E	S	T	F	K	K	W	V	E	L	V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	L	L	G	H	W	Y	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	C	P	P	G	A	I	G	V	T	Y	D	T	L	S	V	H	A	P	K	Y	C	Q
Template Known Secondary structure																			T	T	T	T	S	S											S	S	G	G	G	G	G	G	G	T	T	T	T	T	S	T	T						G	G	G	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1065	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	Q	T	S	L	Q	F	P	Q	I	Q	R	F	D	E	H	F	V	L	D	I	L	V	D	D	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A	T	G
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	A	R	E	L	Q	K	L	G	A	T	F	E	R	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	S	L	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G
Template Known Secondary structure										T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B	G	G	G	T		S	S		S							G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1145	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.																				.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions