Job Description P00363 Confidence 98.80% Date Thu Jan 5 10:56:34 GMT 2012 Rank 221 Aligned Residues 175 % Identity 11% Template c3nrnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pf1083; PDBTitle: crystal structure of pf1083 protein from pyrococcus furiosus,2 northeast structural genomics consortium target pfr223 Resolution 2.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	.	.	.	.	.	.	.	.	.	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence																							.	.																			.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		A	V	V	V	G	A	G	L	G	G	L	L	A	G	A	F	L	A	R	N	G	.	.	H	E	I	I	V	L	E	K	S	A	X	I	G	G	R	F	T	N	L	P	Y	K	G	F	Q	L	S	T	G	A	L	H	X	I	P	H	G	E	D	G	P	L	A	H	L	L	R	I	L	G	A	K	V	E	I	V	N
Template Known Secondary structure						S		S													T	T	.	.								S	S	S	S	S		T	T	S	S					T	T					S	S	S		S			T	T	T	T	S	S										T
Template Predicted Secondary structure																							.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																																			71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	G	G	D	W	L	C	E	Q	D	V	V	D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	.	.	.	.	.	G	C	P	W	S	R	R	P	D	G	S	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		S	N	P	K	G	K	I	L	W	E	G	K	I	F	H	Y	R	E	S	W	K	F	L	S	K	L	L	A	E	I	R	X	N	K	L	P	K	E	E	I	P	A	D	E	W	I	K	E	K	I	G	E	N	E	F	L	L	S	V	L	E	S	F	A	G	W	A	D	S	V	S	L	S	D	L	T	A	L	E	L
Template Known Secondary structure			S	S	S						T	T					G	G	G	G	G	G	G										T	T							S	B									T																			S	S		G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q	R	F	D	E	H	F	V	L	D	I	L	V	D	D	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A
Query Conservation
Alig confidence																					.																.																							.	.	.	.	.	.	.	.
Template Conservation																					.																.																							.	.	.	.	.	.	.	.
Template Sequence		A	K	E	I	R	A	A	L	R	W	G	G	P	G	L	I	R	G	G	.	C	K	A	V	I	D	E	L	E	R	I	I	X	E	N	.	K	G	K	I	L	T	R	K	E	V	V	E	I	N	I	E	E	K	K	V	Y	T	.	.	.	.	.	.	.	.	R	D	N	E	E	Y	S	F	D	V	A	I	S	N
Template Known Secondary structure													S					T	T		.														T	T	.	T					S	S								T	T	T	T					.	.	.	.	.	.	.	.	T	T							S
Template Predicted Secondary structure																					.																.																							.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.									.	.	.	.	.	230	.	.	.	.	.	.	.	.
		193	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		239	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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