Job Description P00363 Confidence 99.07% Date Thu Jan 5 10:56:34 GMT 2012 Rank 189 Aligned Residues 164 % Identity 23% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.							.	.	.	.	80	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	.	.	.	.	.	.	W	L	C	E	Q	D
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																							.	.																				.																										.	.	.	.	.	.
Template Conservation																							.	.																				.
Template Sequence		V	L	V	V	G	A	G	P	S	G	L	E	A	A	R	A	L	G	V	R	G	.	.	Y	D	V	V	L	A	E	A	G	R	D	L	G	G	R	V	T	Q	E	.	S	A	L	P	G	L	S	A	W	G	R	V	K	E	Y	R	E	A	V	L	A	E	L	P	N	V	E	I	Y	R	E	S	P	M	T	G	D
Template Known Secondary structure								S														T	.	.								S	S	S	S	S		T						.		T	S	T	T		G	G	G	G												T		T	T					S	S
Template Predicted Secondary structure																							.	.																				.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		82	.	.	.	.	.																																																											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	D	Y	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	V	E	F	G	F	E	H	V	I	T	A	T	G	A	T	W	R	T	D	G	V	A	R	F	H	T	T	A	L	P	I	A	E	G	M	Q	V	L	G	P	D	D	L	F	A	G	R	L	P	D	G	K	K	V	V	V	Y	D	D	D	H	Y	Y	L	G	G	V	V	A	E	L	L	A	Q	K	G	Y	E
Template Known Secondary structure						T	T														S	S			S	S	S		S	S				B		T	T	S											T				S	S	S								S		S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q	R	F	D	E	H	F	V	L	D	I	L	V	D	D	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		V	S	I	V	T	P	G	A	Q	V	S	S	W	T	N	N	T	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	R	I	Q	R	R	L	I	E	N	G	V	A	R	V	T	D	H	A	V	V	A	V	G	A	G	.	.	.	.	.	G	V	T	V	R	D	T	Y	A	S	I	E	R	E
Template Known Secondary structure							S	S	S	S	T	T	G	G	G	G	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T						S								T	T	.	.	.	.	.							T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.																570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.						.	.	.	600	.	.	.	.	.	.	.	.	.	610
		184	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	A	N	A	V	V	M	A	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	C	D	A	V	V	M	V	T	A
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		611	.	.	.	.	.	.	.	.	620	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions