Job Description P00363 Confidence 88.94% Date Thu Jan 5 10:56:34 GMT 2012 Rank 368 Aligned Residues 128 % Identity 14% Template c3hn7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution Resolution 1.65 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	A	I	V	G	A	G	G	A	G	L	R	A	.	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	W	L	C	E	Q	D	V	V	D	Y	F
Query Conservation															.
Alig confidence															.									.	.																																																					.	.	.	.
Template Conservation																								.	.																																																					.	.	.	.
Template Sequence		I	H	I	L	G	I	C	G	T	F	X	G	S	L	A	L	L	A	R	A	L	G	.	.	H	T	V	T	G	S	D	A	N	I	Y	P	P	X	S	T	Q	L	E	Q	A	G	V	T	I	E	E	G	Y	L	I	A	H	L	Q	P	A	P	D	L	V	V	V	G	N	A	X	K	R	G	X	D	.	.	.	.
Template Known Secondary structure						T	T	T	S													T	T	.	.								S				T	T								T	T						S			G	G	G	G		S			S						T	T			T	T	S		.	.	.	.
Template Predicted Secondary structure																								.	.																																																					.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q
Query Conservation
Alig confidence		.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	.	.	.	.	V	I	E	Y	X	L	D	T	G	L	R	Y	T	S	G	P	Q	.	.	.	.	F	L	S	E	Q	V	L	Q	S	R	H	V	I	A	V	A	G	T	H	G	K	T	T	T	T	T	X	L	A	W	I	L	H	Y	A	G	I	D
Template Known Secondary structure		.	.	.	.	.	.									T									.	.	.	.						T	G	G	G	S								S	S																T	T
Template Predicted Secondary structure		.	.	.	.	.	.																		.	.	.	.
Template SS confidence
								77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions