Job Description P00363 Confidence 100.00% Date Thu Jan 5 10:56:34 GMT 2012 Rank 7 Aligned Residues 560 % Identity 19% Template c3gyxA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:adenylylsulfate reductase; PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas Resolution 3.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		M	Q	T	F	Q	A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	.	.	.	.	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	W
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.
Template Conservation
Template Sequence		I	V	E	H	S	V	D	L	L	M	V	G	G	G	M	G	N	C	G	A	A	F	E	A	V	R	W	A	D	K	Y	A	P	E	A	K	I	L	L	V	D	K	A	S	L	E	R	S	G	A	V	A	Q	G	L	S	A	I	N	T	Y	L	G	D	N	N	A	D	D	Y	V	R	M	V	R	T	D	L	M	G
Template Known Secondary structure								S							S																			T	T								S	S		T	T	T		S	T	T	T	T										T	T	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.												.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	C	E	Q	D	V	V	D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	.	.	.	.	.	.	.	.	.	.	.	G	F	H	M	L	H	T	L	F	Q	T	S	L
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	R	E	D	L	I	Y	D	L	G	R	H	V	D	D	S	V	H	L	F	E	E	W	G	L	P	V	W	I	K	D	E	H	G	H	N	L	D	G	A	Q	A	K	A	A	G	K	S	L	R	N	G	D	K	P	V	R	S	G	R	W	Q	I	M	I	N	G	E	S	Y	K	V	I	V	A	E	A	A	K
Template Known Secondary structure																										T			B					S	S	S												T			T	T	T	T			B			S	S	T	T							T	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		146	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.
Predicted Secondary structure				.																			.	.	.																																								.	.	.	.	.	.	.	.	.
Query SS confidence				.																			.	.	.																																								.	.	.	.	.	.	.	.	.
Query Sequence		Q	F	.	P	Q	I	Q	R	F	D	E	H	F	V	L	D	I	L	V	D	D	.	.	.	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A	T	G	G	A	G	R	V	Y	R	Y	N	T	.	.	.	.	.	.	.	.	.	N	G	G	I	V	T	G	D
Query Conservation				.																			.	.	.																																								.	.	.	.	.	.	.	.	.
Alig confidence				.																			.	.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	L	G	Q	D	R	I	I	E	R	I	F	I	V	K	L	L	L	D	K	N	T	P	N	R	I	A	G	A	V	G	F	N	L	R	A	N	E	V	H	I	F	K	A	N	A	M	V	V	A	C	G	G	A	V	N	V	Y	R	P	R	S	V	G	E	G	M	G	R	A	W	Y	P	V	W	N	A	G	S
Template Known Secondary structure						T	T	T				S										S	S	S	T	T	B									S	S	S	S								S									B		S	S	S			S			S	G	G	G	G			S	S		T	T		B	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	M	A	L	S	H	G	V	P	L	R	D	M	E	F	V	Q	Y	H	P	T	G	L	P	G	S	G	I	L	M	T	E	G	C	R	G	E	G	G	I	L	V	N	K	N	G	Y	R	Y	L	Q	D	Y	G	M	G	P	E	T	P	L	G	E	P	K	N	K	Y	M	E	L	G	P	R	D	K	V	S
Query Conservation
Alig confidence																																.																													.
Template Conservation																																.																													.
Template Sequence		T	Y	T	M	C	A	Q	V	G	A	E	M	T	M	M	E	N	R	F	V	P	A	R	F	K	D	G	Y	G	P	.	V	G	A	W	F	L	L	F	K	A	K	A	T	N	C	K	G	E	D	Y	C	A	T	N	R	A	M	L	.	K	P	Y	E	E	R	G	Y	A	K	G	H	V	I	P	T	C	L	R	N
Template Known Secondary structure								T	T	T						T	T			B						T	T	T				.															T	T	S							T	G	G	G	G	.					T	T	T	S	S	T	T	T								T
Template Predicted Secondary structure																																.																													.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.										310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		Q	A	F	W	H	E	W	R	K	G	N	T	I	S	T	P	R	.	.	.	.	.	.	.	.	.	G	D	V	V	Y	L	D	L	R	H	L	G	E	K	K	L	H	E	R	L	P	F	I	C	E	L	A	K	A	Y	V	.	.	G	V	D	P	V	K	E	P	I	P	V	R	P	T	A	H	Y	T	M	G	G
Query Conservation																			.	.	.	.	.	.	.	.	.																																.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																																.	.
Template Conservation
Template Sequence		H	M	M	L	R	E	M	R	E	G	R	G	P	I	Y	M	D	T	K	T	A	L	Q	T	S	F	A	T	M	S	P	A	Q	Q	K	H	L	E	A	E	A	W	E	D	F	L	D	M	C	V	G	Q	A	N	L	W	A	A	T	N	C	A	P	E	E	R	G	S	E	I	M	P	T	E	P	Y	L	L	G	S
Template Known Secondary structure										T	T																T	T	T	S																		T	T											T	T			T	T	T											B	B		S	S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
																												362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	T	D	Q	N	C	E	T	R	I	K	G	L	F	A	V	G	E	C	S	S	V	G	L	H	G	A	N	R	L	G	S	N	S	L	A	E	L	V	V	F	G	R	L	A	G	E	Q	A	T	E	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.
Template Sequence		H	S	G	C	C	G	I	W	A	S	G	P	D	E	A	W	V	P	E	D	Y	K	V	R	A	A	N	G	K	V	Y	N	R	M	T	T	V	E	G	L	W	T	C	A	D	G	V	G	A	S	.	.	.	.	.	.	.	G	H	K	F	S	S	G	S	H	A	E	G	R	I	V	G	K	Q	M	V	R	W	Y
Template Known Secondary structure		S	S													T	T	S		G	G	G					T	T	S				T	T	B		S	S	B	T					S	S	S	B		S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.								.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.														440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.						.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Query Sequence		A	T	A	G	N	G	N	E	A	A	I	E	A	Q	A	A	G	V	E	Q	R	L	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	N	Q	D	G	G	E	N	W	A	K	I	R	D	E	M	G	L	A	M	E	E	G	C	G	I	Y	.	.	.	.	.	R	T	P	E	L	M	Q	K	T	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation
Template Sequence		L	D	H	K	D	F	K	P	E	F	V	E	T	A	E	E	L	K	T	L	I	Y	R	P	Y	Y	N	Y	E	K	G	K	G	A	S	T	C	P	V	V	N	P	E	Y	I	S	P	K	N	F	M	M	R	L	I	K	C	T	D	E	Y	G	G	G	V	G	T	Y	Y	N	T	S	K	A	L	L	D	T	G	F
Template Known Secondary structure				T		S						S	S										T										G	G	G		S	S	S	S	S		S	S	S	B																	T	T		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530			.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		D	K	L	A	E	L	Q	E	R	F	K	R	V	R	I	T	D	T	S	S	V	F	N	T	D	L	L	Y	T	I	E	L	G	H	G	L	N	V	A	E	C	M	A	H	S	A	M	A	R	K	E	S	R	.	.	G	A	H	Q	R	L	D	E	G	C	T	E	R	D	D	V	N	F	L	K	H	T	L	A	F
Query Conservation																																																							.	.
Alig confidence																				.	.	.	.	.																															.	.								.	.
Template Conservation																				.	.	.	.	.																																								.	.
Template Sequence		W	L	M	E	M	L	E	E	D	S	L	K	L	A	A	R	D	L	.	.	.	.	.	H	E	L	L	R	C	W	E	N	Y	H	R	L	W	T	V	R	L	H	M	Q	H	I	A	F	R	E	E	S	R	Y	P	G	F	Y	Y	R	A	D	.	.	F	L	G	L	D	D	S	K	W	K	C	F	V	N	S	K
Template Known Secondary structure											G	G	G	B			S	S		.	.	.	.	.																												S		S	S	T	T	T				T	T	.	.	S		S			T	T	T			S
Template Predicted Secondary structure																				.	.	.	.	.																																								.	.
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.						.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.			.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	A	D	G	T	T	R	L	E	Y	S	D	V	K	I	T	T	L	P	P	A
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		Y	.	D	P	A	K	K	E	T	K	I	F	K	K	P	Y	Y	Q	I	I	P	D
Template Known Secondary structure			.		T	T	T	T													S
Template Predicted Secondary structure			.
Template SS confidence
		644		.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.