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Job DescriptionP00363
Confidence99.52%DateThu Jan 5 10:56:34 GMT 2012
Rank125Aligned Residues315
% Identity16%Templatec3e1tA_
PDB info PDB header:flavoproteinChain: A: PDB Molecule:halogenase; PDBTitle: structure and action of the myxobacterial chondrochloren2 halogenase cndh, a new variant of fad-dependent halogenases
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD
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Template Sequence  VFDLIVIGGGPGGSTLASFVAMRG. . HRVLLLEREAFPRHQIGESL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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STTT..


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   7..10.........20.........30 .........40.........50
 
   85....90.........100.. .......110.........120.........130.........140.........
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Query Sequence  YFVHHCPTEMTQLELWGC. . . . . . . . . . . . . . . PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQ
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Template Sequence  . . . . LPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK. G
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TTTT
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   51........60.........70.........80.........90.........100.........110.........120.... .
 
   150.........160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  IQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEF
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Template Sequence  VDVRERHEVIDVLFEGERAVGVRYRN. TEGVELMAHARFIVDASGNRTRVSQA. . . . . . . . . . . . . . . . . VGERVYSRFF
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SSGGG.................T


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   126...130.........140.........150. ........160.........170....... ..180.......
 
   230.........240.........250.........260.........270.........280.........290.........300.........
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Query Sequence  VQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPR
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Template Sequence  QNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DTLTSVGAVV
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   188.190.........200.........210.........220...... ...230......
 
   310.........320.........330.........340.........350.........360.........370.........380.........
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Query Sequence  GDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGA
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Template Sequence  SREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCN. . . . TSFWKNGMALVGDAACF. . . . V
Template Known Secondary structure  TTTSS
TSTT


SSTTSS
S

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   237..240.........250.........260.........270.........280.........290 .........300....... .
 
   390.........400.........410.......
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Query Sequence  NRLGSNSLAELVVFGRLAGEQATERAAT
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Template Sequence  DPVFSSGVHLATYSALLVARAINTCLAG
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STT

TTT
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   309310.........320.........330......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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