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Job DescriptionP00363
Confidence99.86%DateThu Jan 5 10:56:34 GMT 2012
Rank39Aligned Residues319
% Identity17%Templatec2v6oA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin glutathione reductase; PDBTitle: structure of schistosoma mansoni thioredoxin-glutathione2 reductase (smtgr)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQD
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Template Sequence  SKYDYDLIVIGGGSGGLAAGKEAAKYG. . AKTAVLDYVEPTPIGTTWGLGGTCVNVG. . . . . . . . . . . . . . . . . . . CIPK
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   104.....110.........120.........130 .........140.........150........ .160..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDI
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Template Sequence  KLMHQAGLLSHALEDAEHFGWSL. . . . . . . . . DRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDN. QVTYLNAKGRLIS
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   163......170.........180..... ....190.........200.........210......... 220.........230..
 
   162.......170.........180.........190.........200.... .....210.......
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Query Sequence  LVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNT. . . . . . . . . . . . . . . . . . . . . . . . NGGIVTGDGMGMA
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Template Sequence  PHE. . . . . . . VQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFL
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   233.. ....240.........250.........260.........270.........280.........290.........300.....
 
   218.220.........230.........240.........250.........260.........270........ .280.........
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Query Sequence  LSHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEP. . . . . . . . KNKYMELGPRD
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Template Sequence  ASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFE
Template Known Secondary structure  TT


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   306...310.........320.........330.........340.........350.........360.........370.........380.....
 
   290.........300.........310.........320.........330.........340.........350........ .360.......
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Query Sequence  KVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYT. . MGGIETDQN
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Template Sequence  TVIFAV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GREPQLSKVLCETVGVKLDKNGRVVCTDD
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   386...390. ........400.........410.........420
 
   368.370.........380.........390........ .400.........410..
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Query Sequence  CETRIKGLFAVGECSSVGLHGANRLGSNSLA. ELVVFGRLAGEQAT
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Template Sequence  EQTTVSNVYAIGDINA. . . . . . . . . GKPQLTPVAIQAGRYLARRLF
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GGGBT.........TS


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   421........430...... ...440.........450.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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