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Job DescriptionP00363
Confidence99.47%DateThu Jan 5 10:56:34 GMT 2012
Rank139Aligned Residues299
% Identity17%Templatec2v3aA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:rubredoxin reductase; PDBTitle: crystal structure of rubredoxin reductase from pseudomonas2 aeruginosa.
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD
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Template Sequence  RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKD. . . . . . . . . . . . . . . . . . . . . . . . . .
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STT
SSS

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GGGGGGTTTTT

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   4.....10.........20.........30.........40.........50.......
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  YFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ADGLAMAEPGAMAEQLNARILTHTRVTGIDPG
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TT

S



GG
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   58.60.........70.........80.........
 
   165....170.........180.........190......... 200.........210.........220.........230.........240..
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Query Sequence  DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV. . YRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGSGI
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Template Sequence  HQRIWI. . . . . . . . . GEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEF
Template Known Secondary structure  GT.........TT
S







BSTTTT

SSTT



S
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   90..... ....100.........110.........120.........130.........140.........150.........160
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  LMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGE
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Template Sequence  ANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASL. KKAGEGLEAHLSDGEVIPCDLVVSA.
Template Known Secondary structure  TT
SSSSSSTTTS
TTT
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.TTTTS
S
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   161........170.........180.........190.........200.........210... ......220.........230........
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  KKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVV
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Template Sequence  . . . . . . . . . . . . . . . . . VGLRPRTELAF. . AAGLAVNRGIVVDRSLRTSHANIYALGDCAE. VDGLNLLY. . . . VMPLMA
Template Known Secondary structure  .................S


..TT

BSSS
TT
B
SSTT
GGG.TTB


S....
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   239240......... 250.........260.........270.........280 ........ .290....
 
   403......410..
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Query Sequence  FGRLAGEQAT
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Template Sequence  CARALAQTLA
Template Known Secondary structure  T
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   295....300....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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