Job Description P00363 Confidence 99.69% Date Thu Jan 5 10:56:34 GMT 2012 Rank 75 Aligned Residues 190 % Identity 15% Template c2rghA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																												.														.	.	.	.	.	.	.	.
Query SS confidence																																																												.														.	.	.	.	.	.	.	.
Query Sequence		Q	A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	.	F	E	Y	H	F	H	D	T	V	A	G	G	D	.	.	.	.	.	.	.	.
Query Conservation																																																												.														.	.	.	.	.	.	.	.
Alig confidence																										.	.																																	.														.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		E	L	D	L	L	I	I	G	G	G	I	T	G	A	G	V	A	V	Q	A	A	A	S	G	.	.	I	K	T	G	L	I	E	X	Q	D	F	A	E	G	T	S	S	R	S	T	K	L	V	H	G	G	I	R	Y	L	K	T	F	D	V	E	V	V	A	D	T	V	G	E	R	A	V	V	Q	G	I	A	P	H
Template Known Secondary structure			B	S							S													T	T	.	.								S	S	S	T	T		S	G	G	G	S	S		S						G	G	G	G	G	G	T																				T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
																		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	L	C	E	Q	D	V	V	D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	.	.	.	.	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template Conservation
Template Sequence		I	P	K	P	D	P	X	L	L	P	I	Y	E	D	E	G	A	T	T	F	N	X	F	S	V	K	V	A	X	D	L	Y	D	K	L	A	N	V	T	G	T	K	Y	E	N	Y	T	L	T	P	E	E	V	L	E	R	E	P	F	L	K	K	E	G	L	K	G	A	G	V	Y	L	D	F	R	N	N	D	A	R
Template Known Secondary structure		S	S											S	S	S	S	S		S																		T		S	S	S	T	T															T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q	R	F	D	E	H	F	V	L	D	I	L	V	D	D	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A	T	G	G	A	G
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		L	V	I	D	N	I	K	K	A	A	E	D	.	G	A	Y	L	V	S	K	X	K	A	V	G	F	L	Y	E	G	D	Q	I	V	G	V	K	A	R	D	L	L	T	D	E	V	I	E	I	K	A	K	L	V	I	N	T	S	G	P	W	V
Template Known Secondary structure													T	.	T					S	S										T	T										T	T	T								B	S							G	G	G
Template Predicted Secondary structure														.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions