Job Description P00363 Confidence 100.00% Date Thu Jan 5 10:56:34 GMT 2012 Rank 22 Aligned Residues 376 % Identity 18% Template c2i0zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad(fad)-utilizing dehydrogenases; PDBTitle: crystal structure of a fad binding protein from bacillus2 cereus, a putative nad(fad)-utilizing dehydrogenases Resolution 1.84 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	W	L	C	E	Q	D	V	V
Query Conservation
Alig confidence																											.	.																																.	.	.	.	.
Template Conservation																											.	.																																.	.	.	.	.
Template Sequence		M	H	Y	D	V	I	V	I	G	G	G	P	S	G	L	M	A	A	I	G	A	A	E	E	G	.	.	A	N	V	L	L	L	D	K	G	N	K	L	G	R	K	L	A	I	S	G	G	G	R	C	N	V	T	N	R	L	P	.	.	.	.	.	L	D	E	I	V	K	H	I	P	G	N	G	R	F	L	Y	S
Template Known Secondary structure					S							S													T	T	.	.								S	S	S	S	S							T	G	G	G	T							S		.	.	.	.	.							T		T	B	T	G	G	G	G
Template Predicted Secondary structure																											.	.																																.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q	R	F	D	E	H	F	V	L	D	I	L	V
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		A	F	S	I	F	N	N	E	D	I	I	T	F	F	E	N	L	G	V	K	L	K	E	E	D	H	G	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	V	S	N	K	A	Q	S	V	V	D	A	L	L	T	R	L	K	D	L	.	G	V	K	I	R	T	N	T	P	V	E	T	I	E	Y
Template Known Secondary structure						S												T	T							G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T																	T	.	T						S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.															.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		D	D	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A	T	G	G	A	G	R	V	Y	R	Y	N	T	N	G	G	I	V	T	G	D	G	M	G	M	A	L	S	H	G	V	P	L	R	D	M	E	.	.	F	V	Q	Y	H	P	T	G	L	P	G	S	G
Query Conservation																																																																			.	.
Alig confidence																	.	.	.	.	.																	.	.	.	.	.	.																								.	.
Template Conservation																	.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		E	N	G	Q	T	K	A	V	I	L	Q	T	G	E	V	.	.	.	.	.	L	E	T	N	H	V	V	I	A	V	G	G	K	S	V	P	.	.	.	.	.	.	Q	T	G	S	T	G	D	G	Y	A	W	A	E	K	A	G	H	T	I	T	E	L	F	P	T	E	V	P	I	L	S	N	E	P	F	I	R	D
Template Known Secondary structure			T	T								T	T				.	.	.	.	.				S									S	S	S	G	.	.	.	.	.	.	G	G	S		S	S									T	T										S												T
Template Predicted Secondary structure																	.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.															.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query Sequence		I	L	M	T	E	G	C	R	G	E	G	G	I	L	V	N	K	N	G	Y	R	Y	L	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	M	G	P	E	T	P	L	G	E	P	K	N	K	Y	M	E	L	G	P	R	D	K	V	S	Q	A	F	W	H	E	W	R	K	G	.	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		R	S	L	Q	G	L	A	L	R	D	I	N	L	S	V	L	N	A	I	I	S	H	K	M	D	M	L	F	T	H	F	G	L	S	G	P	A	A	L	R	C	S	Q	F	V	V	K	A	L	K	K	F	K	T	N	T	I	Q	M	S	I	D	A	L	P	E	E	N	S	E	Q	L	F	Q	R	M	L	K	Q	M
Template Known Secondary structure		T	T	T	T	T																									S	S				S																				S								S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
														303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																												.	.																																						.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																												.	.																																						.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	N	T	I	S	T	P	R	G	D	V	V	Y	L	D	L	R	H	L	G	E	K	K	L	H	E	R	L	.	.	P	F	I	C	E	L	A	K	A	Y	V	G	V	D	P	V	K	E	P	I	P	V	R	P	T	A	H	Y	T	M	G	G	I	E	T	D	Q	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																												.	.																																						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																												.	.																																						.	.
Template Conservation
Template Sequence		K	E	D	P	K	K	G	I	K	N	V	L	K	G	Y	V	P	E	R	Y	F	L	F	L	L	E	K	N	E	I	D	G	S	E	Q	A	G	Q	V	S	H	E	K	I	R	A	L	V	K	D	F	K	E	F	T	V	N	V	N	G	T	Q	S	I	E	K	A	F	V	T	G	G	G	V	S	V	K	E	I	N
Template Known Secondary structure		T	T	S	T	T	S	B					T	T	T	S	S												T	T			T	T	S	B	G	G	G	S																									G	G	G		S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
					367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	N	C	E	T	R	I	K	G	L	F	A	V	G	E	C	S	S	V	G	L	H	G	A	N	R	L	G	S	N	S	L	A	E	L	V	V	F	G	R	L	A	G	E	Q	A	T	E	R	A	A
Query Conservation		.	.	.
Alig confidence		.	.	.																		.	.				.	.
Template Conservation																						.	.				.	.
Template Sequence		P	K	E	M	S	S	K	F	T	N	G	L	Y	F	C	G	E	V	L	D	.	.	I	H	G	.	.	Y	T	G	G	Y	N	I	T	S	A	L	V	T	G	R	I	A	G	T	T	A	G	E	N	A	K
Template Known Secondary structure		T	T	T	T			S	S	S	B	T					G	G	G	B	S	.	.		B		.	.		T	T	T
Template Predicted Secondary structure																						.	.				.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.			.	.	.			.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420