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Job Description | P00363 | Confidence | 88.27% | Date | Thu Jan 5 10:56:34 GMT 2012 |
Rank | 371 | Aligned Residues | 31 |
% Identity | 23% | Template | c2g1uA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:hypothetical protein tm1088a; |
PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution
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Resolution | 1.50 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | A | I | V | G | A | G | G | A | G | L | R | A | A | I | A | A | A | Q | A | N | P | N | A | K | I | A | L | I | S | K | V | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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