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Job DescriptionP00363
Confidence92.31%DateThu Jan 5 10:56:34 GMT 2012
Rank321Aligned Residues109
% Identity15%Templatec2f00A_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20 .........30.........40.........50.........60.........70.........80......
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Query Sequence  LAIVGAGGAGLRA. AIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYF
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Template Sequence  IHFVGIGGAGXGGIAEVLANEG. . YQISGSDLAPN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTSTTTT..

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   22.......30.........40... ......50....
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  VHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDG
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Template Sequence  . . . . . PVTQQLXNLGATIYFNHRPENVRDASVVVVSS. . . . . . . . . AISADNPEIVAAHEA. RIPVIRRAEXLAELXRFR
Template Known Secondary structure  .....TT
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GGGGTT
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   55....60.........70.........80...... ...90.........100. ........110.........
 
   167..170........
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Query Sequence  HVRGLVAMNMME
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Template Sequence  HGIAIAGTHGKT
Template Known Secondary structure  SSS
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   120.........130.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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