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Job DescriptionP00363
Confidence100.00%DateThu Jan 5 10:56:34 GMT 2012
Rank9Aligned Residues467
% Identity36%Templatec2e5vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-aspartate oxidase; PDBTitle: crystal structure of l-aspartate oxidase from2 hyperthermophilic archaeon sulfolobus tokodaii
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  LAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFV
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Template Sequence  IYIIGSGIAGLSAGVALRRAG. . KKVTLISKRID. GGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT
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STT..


SSTT.
SSGGG

S



STT

TT
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   2.......10.........20.. .......30... ......40.........50.........60.........70........
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  HHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGH
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Template Sequence  SEAKNVIETFESWGFEFEED. . . . . . LRLEGGHTKRRVLHRTDETGREIFNFLLKLAREE. GIPIIEDRLVE. IRVKDGK
Template Known Secondary structure  TT



SS......
B

TT
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SSS
T.T




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   7980.........90........ .100.........110.........120.........130.. .......140... ......150
 
   168.170.........180.........190.........200.........210.........220.........230....... ..240.....
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Query Sequence  VRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGL. . PGSGILMT
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Template Sequence  VTGFVT. . . . EKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGEVFLLT
Template Known Secondary structure  ....TTT


S




GGGSSSBSS
TT
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TT


TT

GGG



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   151..... ...160.........170.........180.........190.........200.........210.........220......
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  EGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKL
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Template Sequence  ETLRGEGAQIINENGERFLFNY. . . . . . . . . . . . DKRGELAPRDILSRAIYIEMLKGHK. . . . . . . . VFIDLSKI. . EDF
Template Known Secondary structure  TTT
TT


GGGGT............
TTGGGS
T

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..TT
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   227..230.........240........ .250.........260.........270... ......280. ...
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  HERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGR
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Template Sequence  ERKFPVVAKYLARH. GHNY. KVKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGI
Template Known Secondary structure 
T.T

T.TS

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TT
B
SSBT
GGG
SSSTTS

TT
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   285....290........ .300.. .......310.........320.........330.........340.........350.........360..
 
   406...410.........420.........430.........440.........450.........460.........470.........480.....
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Query Sequence  LAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQE
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Template Sequence  NLPRYVDSSWEGISTDDGIV. . . . . . . . . . . . . . . HSVRISGNKTLSLKEIRRINWENVGIIRNEEKLVKAINTYSS. . .
Template Known Secondary structure  GGGTTTS






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SSSSB
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   363......370.........380.. .......390.........400.........410.........420....
 
   486...490.........500.........510.........520.........530.........540.........550......
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Query Sequence  RFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . STQNEAIISYLTALAAEIRKESRGNHFRED. . YPYKDP. NWEKRIYFKL
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S
BTTB
BTT..B
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G.GG
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   425....430.........440.........450.... .....460 .........470
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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