Job Description P00363 Confidence 99.82% Date Thu Jan 5 10:56:34 GMT 2012 Rank 44 Aligned Residues 349 % Identity 15% Template c1tytA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:trypanothione reductase, oxidized form; PDBTitle: crystal and molecular structure of crithidia fasciculata2 trypanothione reductase at 2.6 angstroms resolution Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	T	F	Q	A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	W	L	C	E	Q
Query Conservation
Alig confidence					.																											.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																											.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	R	.	A	Y	D	L	V	V	I	G	A	G	S	G	G	L	E	A	G	W	N	A	A	S	L	H	K	K	.	R	V	A	V	I	D	L	Q	K	H	H	G	P	P	H	Y	A	A	L	G	G	T	C	V	N	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	P
Template Known Secondary structure				S	.	S									S																	.							S		S	S	S	B	T	T	T	B			T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																											.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																				.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q	R	F	D	E	H	F	V	L	D
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.																																										.
Template Conservation																															.	.	.	.	.	.	.	.	.																																										.
Template Sequence		K	K	L	M	V	T	G	A	N	Y	M	D	T	I	R	E	S	A	G	F	G	W	E	L	D	R	E	S	V	.	.	.	.	.	.	.	.	.	R	P	N	W	K	A	L	I	A	A	K	N	K	A	V	S	G	I	N	D	S	Y	E	G	M	F	A	D	T	E	G	L	T	F	H	Q	G	F	G	A	L	.
Template Known Secondary structure																			G	G	G	T					G	G	G		.	.	.	.	.	.	.	.	.																												T	S	T	T						S					.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.										.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	D	D	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A	T	G	G	A	G	R	V	Y	R	Y	N	T	N	G	G	I	V	T	G	D	G	M	G	M	A	L	S	H	G	V	P	L	R	D	M	E	F	V	Q	Y	H	P	T	G	L	P	G	S
Query Conservation
Alig confidence		.	.																																																																					.	.	.	.
Template Conservation		.	.																																																																					.	.	.	.
Template Sequence		.	.	Q	D	N	H	T	V	L	V	R	E	S	A	D	P	N	S	A	V	L	E	T	L	D	T	E	Y	I	L	L	A	T	G	S	W	P	Q	H	L	G	I	E	G	D	D	L	C	I	T	S	N	E	A	F	Y	L	D	E	A	P	K	R	A	L	C	V	G	G	G	.	.	.	.	Y	I	S	I	E	F
Template Known Secondary structure		.	.			T	T						S	S	S	S	T	T	S																								S	B	T	G	G	G		B						T	T		S	S			S							S	S	.	.	.	.
Template Predicted Secondary structure		.	.																																																																					.	.	.	.
Template SS confidence
				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	L	M	T	E	G	C	R	G	E	G	G	I	L	V	N	K	N	G	Y	R	Y	L	Q	D	Y	G	M	G	P	E	T	P	L	G	E	P	K	N	K	Y	M	E	L	G	P	R	D	K	V	S	Q	A	F	W	H	E	W	R	K	G	N	T	I	S	T	P	R	G	D	V	V	Y	L	D	L	R	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	I	F	N	A	Y	K	A	R	G	G	Q	V	D	L	A	Y	R	G	D	M	I	L	R	G	F	D	S	E	L	R	K	Q	L	T	E	Q	L	R	A	N	G	I	N	V	R	T	H	E	N	P	A	K	V	T	K	N	A	D	G	T	R	H	V	V	F	E	S	G	A	E	A	D	Y	D	V	V	M	L
Template Known Secondary structure									S		T	T								S	S	S	S	S	S	T	T	S															T	T						S										T	T	S							T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		G	E	K	K	L	H	E	R	L	P	F	I	C	E	L	A	K	A	Y	V	G	V	D	P	V	K	E	P	I	P	V	R	.	.	P	T	A	H	Y	T	M	G	G	I	E	T	D	Q	N	C	E	T	R	I	K	G	L	F	A	V	G	E	C	S	S	V	G	L	H	G	A	N	R	L	G	S	N	S	L	A
Query Conservation																																		.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																																.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	R	V	P	R	S	Q	T	L	Q	L	D	K	A	G	V	E	V	A	K	N	G	A	I	K	V	D	A	Y	S	K	T	N	V	D	N	I	Y	A	I	G	D	V	T	D	.	.	.	.	.	.	.	.	.	R	V	M	L	T	P
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							T	T	S						T			B		T	T	S		B				T	T	S	B		S	S	T	T					G	G	G	G		.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		284																			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330										.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	V	F	G	R	L	A	G	E	Q	A	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	I	N	E	G	A	A	F	V	D	T	V	F	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions