Job Description P00363 Confidence 99.78% Date Thu Jan 5 10:56:34 GMT 2012 Rank 47 Aligned Residues 344 % Identity 13% Template c1ndaD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:trypanothione oxidoreductase; PDBTitle: the structure of trypanosoma cruzi trypanothione reductase2 in the oxidized and nadph reduced state Resolution 3.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	W	L	C	E	Q	D	V	V	D	Y
Query Conservation
Alig confidence																									.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	L	V	V	I	G	A	G	S	G	G	L	E	A	A	W	N	A	A	T	L	Y	.	K	K	R	V	A	V	I	D	V	Q	M	V	H	G	P	P	F	F	S	A	L	G	G	T	C	V	N	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	P	K	K	L	M	V
Template Known Secondary structure		B	S							S														S	.									S		S	S	S	B	T	T	T	B			T	T						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																				.	.	.	60	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q	R	F	D	E	H	F	V	L	D	I	L	V	D	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																																										.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																																										.	.	.
Template Sequence		T	G	A	Q	Y	M	E	H	L	R	E	S	A	G	F	G	W	E	F	D	R	T	T	L	.	.	.	.	.	.	.	.	.	R	A	E	W	K	K	L	I	A	V	K	D	E	A	V	L	N	I	N	K	S	Y	E	E	M	F	R	D	T	E	G	L	E	F	F	L	G	W	G	S	L	.	.	.	E	S	K
Template Known Secondary structure													G	G	G	G	T					T	T	T		.	.	.	.	.	.	.	.	.																											T	T		S	S						S					.	.	.		S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																																										.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.										.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A	T	G	G	A	G	R	V	Y	R	Y	N	T	N	G	G	I	V	T	G	D	G	M	G	M	A	L	S	H	G	V	P	L	R	D	M	E	F	V	Q	Y	H	P	T	G	L	P	G	S	G	I	L	M	T
Query Conservation
Alig confidence																																																																			.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		N	V	V	N	V	R	E	S	A	D	P	A	S	A	V	K	E	R	L	E	T	E	N	I	L	L	A	S	G	S	W	P	H	M	P	N	I	P	G	I	E	H	C	I	S	S	N	E	A	F	Y	L	P	E	P	P	R	R	V	L	T	V	G	G	G	.	.	.	.	F	I	S	V	E	F	A	G	I	F	N
Template Known Secondary structure		S						S	S	S	S	T	T	S								B	S																T	T	G	G	G		B						T	T		S	S			S						S	S	S	.	.	.	.	T
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	C	R	G	E	G	G	I	L	V	N	K	N	G	Y	R	Y	L	Q	D	Y	G	M	G	P	E	T	P	L	G	E	P	K	N	K	Y	M	E	L	G	P	R	D	K	V	S	Q	A	F	W	H	E	W	R	K	G	N	T	I	S	T	P	R	G	D	V	V	Y	L	D	L	R	H	L	G	E	K	K	L
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	Y	K	P	K	D	G	Q	V	T	L	C	Y	R	G	E	M	I	L	R	G	F	D	H	T	L	R	E	E	L	T	K	Q	L	T	A	N	G	I	Q	I	L	T	K	E	N	P	A	K	V	E	L	N	A	D	G	S	K	S	V	T	F	E	S	G	K	K	M	D	F	D	L	V	M	M	A	.	.	.	.
Template Known Secondary structure				S		S	S								S	S	S	S	S	S	T	T	S															T	T						T										T	T	S							T	T	S						S						.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		H	E	R	L	P	F	I	C	E	L	A	K	A	Y	V	G	V	D	P	V	K	E	P	I	P	V	R	P	T	A	.	H	Y	T	M	G	G	I	E	T	D	Q	N	C	E	T	R	I	K	G	L	F	A	V	G	E	C	S	S	V	G	L	H	G	A	N	R	L	G	S	N	S	L	A	E	L	V	V	F	G
Query Conservation																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	R	S	P	R	T	K	D	L	Q	L	Q	N	A	G	V	M	I	K	N	G	G	V	Q	V	D	E	Y	S	R	T	N	V	S	N	I	Y	A	I	G	D	V	T	N	.	.	.	.	.	.	.	.	.	R	V	M	L	T	P	V	A	I	N	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					T	T	T	T	S		G	G	G	T	T			B	S	S	S	S	B				T	T		B		S	S	T	T					T	T	T	T	T	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template SS confidence
																285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.										330	.	.	.	.	.	.	.	.	.	340	.
		405	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	G	E	Q	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	V	D	T	V	F
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions