Job Description P00363 Confidence 99.27% Date Thu Jan 5 10:56:34 GMT 2012 Rank 170 Aligned Residues 178 % Identity 16% Template c1ju2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxynitrile lyase; PDBTitle: crystal structure of the hydroxynitrile lyase from almond Resolution 1.47 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.
Template Sequence		S	Y	D	Y	V	I	V	G	G	G	T	S	G	C	P	L	A	A	T	L	S	E	.	.	.	K	Y	K	V	L	V	L	E	R	G	S	L	P	T	A	Y	P	N	V	L	T	A	D	G	F	V	Y	N	L	Q	Q	E	D	D	G	K	T	P	V	E	R	F	V	S	E	D	G	I	D	N	V	R	G	R	V
Template Known Secondary structure											S	T	T									T	T	.	.	.	T	S							S	S	B		G	G	G	S	G	G	G	G	B	G	G	G							S				S	S	S	S							T	T	S								B
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	.	.	.	.	.	.	.	.	.	.	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	W	L	C	E	Q	D	V	V	D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.
Template Sequence		L	G	G	T	S	I	I	N	A	G	V	Y	A	R	A	N	T	S	I	Y	S	A	S	G	V	D	W	D	M	D	L	V	N	Q	T	Y	E	W	V	E	D	T	I	V	Y	K	P	N	S	Q	S	W	Q	S	V	T	K	T	A	.	.	.	.	.	.	F	L	E	A	G	V	H	P	N	H	G	F	S	L	D
Template Known Secondary structure		T	T	G	G	G	G	T	S						B			T	T	S	S	T	T	S	S	S																				B															.	.	.	.	.	.				T	T										B
Template Predicted Secondary structure																																																													.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.										.	.
Query SS confidence																																																									.	.	.										.	.
Query Sequence		V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q	R	F	D	E	H	F	V	L	D	I	L	V	D	D	G	.	.	.	H	V	R	G	L	V	A	M	N	.	.	M	M	E	G	T	L	V	Q	I	R	A
Query Conservation																																																									.	.	.										.	.
Alig confidence			.	.	.	.	.	.																																																	.	.	.										.	.
Template Conservation			.	.	.	.	.	.
Template Sequence		H	.	.	.	.	.	.	E	E	G	T	R	I	T	G	S	T	F	D	N	K	G	T	R	H	A	A	D	E	L	L	N	K	G	N	S	N	N	L	R	V	G	V	H	A	S	V	E	K	I	I	F	S	N	A	P	G	L	T	A	T	G	V	I	Y	R	D	S	N	G	T	P	H	Q	A	F	V	R	S	K
Template Known Secondary structure			.	.	.	.	.	.		S								S	B		T	T	S	B	B			G	G	G	G	G	G	G	S		T	T	T						S											S	S	S		B									T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.
Template SS confidence
		177							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		187	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	V	V	M	A	T	G	G	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	V	I	V	S	A	G	T	I	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions