Job Description P00363 Confidence 100.00% Date Thu Jan 5 10:56:34 GMT 2012 Rank 12 Aligned Residues 403 % Identity 30% Template c1jrxA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c; PDBTitle: crystal structure of arg402ala mutant flavocytochrome c32 from shewanella frigidimarina Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		Q	T	F	Q	A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	.	.	.	.	.	.	.	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																													.	.																													.	.	.	.	.	.	.
Template Conservation																													.	.
Template Sequence		P	H	D	T	V	D	V	V	V	V	G	S	G	G	A	G	F	S	A	A	I	S	A	T	D	S	G	.	.	A	K	V	I	L	I	E	K	E	P	V	I	G	G	N	A	K	L	A	A	G	G	M	N	A	A	W	T	D	Q	Q	K	A	K	K	I	T	D	S	P	E	L	M	F	E	D	T	M	K	G	G
Template Known Secondary structure			S				S							S													T	T	.	.								S	S	S	S	S		T	T	G	G	G			S					S	S							T	T																T
Template Predicted Secondary structure																													.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		D	W	L	C	E	Q	D	V	V	D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	.	.	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	L	Q	F	P	Q	I	Q	R
Query Conservation																																																								.	.
Alig confidence																																		.	.	.	.	.	.	.																.	.																				.
Template Conservation																																		.	.	.	.	.	.	.																																					.
Template Sequence		Q	N	I	N	D	P	A	L	V	K	V	L	S	S	H	S	K	D	S	V	D	W	M	T	A	M	G	A	D	L	T	D	.	.	.	.	.	.	.	V	G	M	M	G	G	A	S	V	N	R	A	H	R	P	T	G	G	A	G	V	G	A	H	V	V	Q	V	L	Y	D	N	A	V	K	R	.	N	I	D	L
Template Known Secondary structure		T	T		S																						T	T						.	.	.	.	.	.	.					T	T		S	S						S	T	T	T																		T	.	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																																					.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.								.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200													.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	E	H	F	V	L	D	I	L	V	D	D	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A	T	G	G	A	G	R	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	N	T	N	G	G	I	V	T	G	D	G	M	G	M	A	L	S	H
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	M	N	T	R	G	I	E	V	L	K	D	D	K	G	T	V	K	G	I	L	V	K	G	M	Y	K	G	Y	Y	W	V	K	A	D	A	V	I	L	A	T	G	G	F	A	K	N	N	E	R	V	A	K	L	D	P	S	L	K	G	F	I	S	T	N	Q	P	G	A	V	G	D	G	L	D	V	A	E	N	A
Template Known Secondary structure			S	S										T	T	S	S									T	T	T								S										T	T										G	G	G	T	T			B	S	S		T	T		S	S									T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		G	V	P	L	R	D	M	E	F	V	Q	Y	H	P	T	G	L	P	G	S	G	I	L	M	T	E	G	C	R	G	E	G	G	I	L	V	N	K	N	G	Y	R	Y	L	Q	D	Y	G	M	G	P	E	T	P	L	G	E	P	K	N	K	Y	M	E	.	.	.	.	L	G	P	R	D	K	V	S	Q	A	F	W
Query Conservation																																																																		.	.	.	.
Alig confidence																																																																		.	.	.	.
Template Conservation
Template Sequence		G	G	A	L	K	D	M	Q	Y	I	Q	A	H	P	T	L	S	V	K	G	G	V	M	V	T	E	A	V	R	G	N	G	A	I	L	V	N	R	E	G	K	R	F	V	N	E	I	T	T	A	D	K	A	S	A	A	I	L	A	Q	T	G	K	S	A	Y	L	I	F	D	D	S	V	R	K	S	L	S	K	I
Template Known Secondary structure		T						T	T										T	T	T		S	B			T					T	T						T	T	S				S		T	T	S											T	S	G	G	G															T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.													.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	W	R	K	G	N	T	I	S	T	P	R	G	D	V	V	Y	L	D	L	R	H	L	G	E	K	K	L	H	E	R	L	P	F	I	C	E	L	A	K	A	Y	V	G	V	D	P	V	K	E	P	.	.	.	.	.	.	.	.	.	.	.	.	I	P	V	R	P	T	A	H	Y	T	M	G	G	I	E	T
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	Y	I	G	L	G	V	A	P	T	A	D	S	L	V	K	L	G	K	M	E	G	I	D	G	K	A	L	T	E	T	V	A	R	Y	N	S	L	V	S	S	G	K	D	T	D	F	E	R	P	N	L	P	R	A	L	N	E	G	N	Y	Y	A	I	E	V	T	P	G	V	H	H	T	M	G	G	V	M	I
Template Known Secondary structure								T						S	S									T	S																			T			T	T	T			S						S		S	S																				B
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		365	.	.	.	.	370							.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		D	Q	N	C	E	T	.	.	.	.	.	.	R	I	K	G	L	F	A	V	G	E	C	S	S	V	G	L	H	G	A	N	R	L	G	S	N	S	L	A	E	L	V	V	F	G	R	L	A	G	E	Q	A	T	E	R	A
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.														.
Template Conservation																											.
Template Sequence		D	T	K	A	E	V	M	N	A	K	K	Q	V	I	P	G	L	Y	G	A	G	E	V	T	G	.	G	V	H	G	A	N	R	L	G	G	N	A	I	S	D	I	I	T	F	G	R	L	A	G	E	E	A	A	K	Y	S
Template Known Secondary structure			T	T						T	T											S	T	T			.	S	S	S	T	T	S			T	T
Template Predicted Secondary structure																											.
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.		.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.