Job Description P31826 Confidence 99.11% Date Thu Jan 5 11:48:49 GMT 2012 Rank 69 Aligned Residues 270 % Identity 14% Template d1pf4a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.80

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		I	A	K	Y	L	C	L	L	K	P	F	W	L	R	K	N	N	K	T	S	V	L	L	I	I	I	I	L	A	M	I	L	G	V	V	K	I	Q	V	W	L	N	D	W	N	N	D	F	F	N	A	L	S	.	Q	K	E	T	D	K	L	W	Q	L	V	L	W	F	P	A	L	L	G	I	F	V	L	I	S	V
Query Conservation																																																							.
Alig confidence																.	.	.	.	.	.	.	.	.																															.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		F	K	R	L	W	T	Y	I	R	L	Y	K	A	G	.	.	.	.	.	.	.	.	.	L	V	V	S	T	I	A	L	V	I	N	A	A	A	D	T	Y	M	I	S	L	L	K	P	L	L	D	E	G	F	G	N	A	E	S	N	F	L	R	I	L	P	F	M	I	L	G	L	M	F	V	R	G	L	S	G	F
Template Known Secondary structure		T	T							T	S		S	S		.	.	.	.	.	.	.	.	.																										T	T	S	S		S					S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	T	W	L	I	K	L	L	T	I	R	W	R	E	W	L	T	D	Y	Y	L	N	R	W	F	A	D	K	N	Y	Y	F	T	Q	I	Y	G	E	H	K	N	T	D	N	P	D	Q	R	I	A	E	D	I	L	L	L	I	S	K	T	L	S	L	S	F	G	F	I	Q	S	L	S	M	L	I	T	F	T	V
Query Conservation
Alig confidence																																					.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		A	S	S	Y	C	L	S	W	V	S	G	N	V	V	M	Q	M	R	R	R	L	F	N	H	F	M	H	M	P	V	R	F	F	D	Q	.	.	.	.	.	E	S	T	G	G	L	L	S	R	I	T	Y	D	S	E	Q	V	A	G	A	T	S	R	A	L	V	S	I	V	R	E	G	A	S	I	I	G	L	L	T
Template Known Secondary structure								T	T	T	G	G	G											T	T	T		S	S								.	.	.	.	.	T	T											G	G	G																T	T					G	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	W	E	S	A	G	T	L	S	F	T	V	G	G	T	E	W	N	I	Q	G	Y	M	V	Y	T	V	V	L	I	V	I	G	G	T	L	F	T	H	K	V	G	K	R	I	R	P	L	N	V	E	K	Q	R	S	E	A	T	F	R	T	N	L	V	Q	H	N	K	Q	A	E	L	I	A	L	S	N	A	E
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	F	W	N	S	W	Q	L	S	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	V	V	A	P	V	V	A	F	A	I	S	F	V	S	K	R	F	R	K	I	S	R	N	M	Q	T	A	M	G	H	R	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	S				S		T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G								T	T	G	G	G	G												T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170																.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Q	R	Q	E	L	S	D	N	F	H	T	I	K	E	N	W	H	R	L	M	N	R	Q	R	W	L	D	Y	W	Q	N	I	Y	S	R	S	L	S	V	L	P	Y	F	L	L	L	P	Q	F	I	S	G	Q	I	N	L	G	G	L	M	K	S	R	Q	A	F	M	L	V	S	N	N	L	S	W	F	I	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	K	L	V	S	A	Q	S	I	A	D	P	V	I	Q	M	I	A	S	L	A	L	F	A	V	L	F	L	A	S	V	D	S	I	R	A	E	L	T	P	G	T	F	T	V	V	F	S	A	M	F	G	L	M	R	P	L	K	A	L	T	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G	G										T	T							G	G	G	G	T	S	S															G	G	G	G	G	G	T	T	T	T	T	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	D	E	L	A	E	L	A	A	V	I	D	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	S	E	F	Q	R	G	M	A	A	C	Q	T	L
Template Known Secondary structure		G	S	S							T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions