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Job DescriptionP31826
Confidence96.17%DateThu Jan 5 11:48:49 GMT 2012
Rank207Aligned Residues125
% Identity12%Templatec3te6A_
PDB info PDB header:gene regulationChain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410....... ..420.........430.........440.........450.........460.......
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Query Sequence  SPGKWLLLKGYSGAGKTTLLKTLSHCW. . . PWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQ
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Template Sequence  SQNKLFYITNADDSTKFQLVNDVXDELITSSARKELPIFDYIHIDALELXDALYEKIWFAIS. KENGDISLEALNFYITN
Template Known Secondary structure  T





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   570.........580.........590.........600.........610.........620.........630. ........640........
 
   468.470.........480.........490.........500.........510.........520.........530.........540......
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Query Sequence  VGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPG
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Template Sequence  VP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KAKKRKTLILIQNPENLLSEKILQYFEKWISSKNSKLSIICVGGHNV
Template Known Secondary structure  S
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   653. .....660.........670.........680.........690.........700.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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