Return to main results Retrieve Phyre Job Id

Job DescriptionP31826
Confidence100.00%DateThu Jan 5 11:48:49 GMT 2012
Rank6Aligned Residues223
% Identity24%Templatec3nhaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   335....340.........350.... .....360.........370.........380.........390.........400.........410
Predicted Secondary structure 


....































Query SS confidence 



















. . . .























































Query Sequence  LAELAAVIDRLYEFHQLTEQ. . . . RPTNKPKNCQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLL
Query Conservation           

         ....            
   



 
     

  


 
  
   



 








Alig confidence 



















....





















.
































Template Conservation        
  

                         
    

  
.     
  


 
  

   
 
 








Template Sequence  GSHMFIDMENMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSY. ADRETLQDVSFTVMPGQTLALVGPSGAGKSTIL
Template Known Secondary structure  GGGGG

T
SS





TT





SS


S.



S
TT

STTSS
Template Predicted Secondary structure 



















.














Template SS confidence 















































































   554.....560.........570.........580.........590......... 600.........610.........620.........630..
 
   411........420.........430 .........440.........450.........460.........470.......
Predicted Secondary structure 










.............



















Query SS confidence 



















. . . . . . . . . . . . .














































Query Sequence  KTLSHCWPWFKGDISSPADS. . . . . . . . . . . . . WYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARI
Query Conservation    
 
      
 
      .............  
 
   

  

 


                
    
      
Alig confidence 



















.............























.





















Template Conservation    
 

     
 
   
              
  
 
       

 


      .                     
Template Sequence  RLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVT. AGNDEVEAAAQAAGIHDAIMAF
Template Known Secondary structure  TTSS

STTGGGS
T
SS



STTSTT.

T
TS
Template Predicted Secondary structure 



























.


Template SS confidence 















































































   634.....640.........650.........660.........670.........680.........690 .........700.........710..
 
   478. 480.........490.........500.........510.........520.........530.........540.........550..
Predicted Secondary structure  .....




























Query SS confidence 

. . . . .








































































Query Sequence  HD. . . . . HDRWGDILSSGEKQRIALARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLAD
Query Conservation    .....    
  








 




     





 

 

      
   
       


 


        
Alig confidence 

.....








































































Template Conservation             
  

 
  


 




     








 

      
   
       


 


    
   
Template Sequence  PEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNAD
Template Known Secondary structure  TTGGG
STTSB




S

SS


TTS

ST
S
Template Predicted Secondary structure 








































Template SS confidence 















































































   713......720.........730.........740.........750.........760.........770.........780.........790..
 
   553......
Predicted Secondary structure 
Query SS confidence 






Query Sequence  DICDISA
Query Conservation   

 

 
Alig confidence 






Template Conservation 

 

  
Template Sequence  QILVIKD
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 






   793......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions