Job Description P31826 Confidence 94.99% Date Thu Jan 5 11:48:49 GMT 2012 Rank 359 Aligned Residues 121 % Identity 18% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	.	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	D	S	W	Y	V	S	Q	T	P	L	I	K	T	G	L	L	K	E	I	I	C	K	A	L	P	L	P	V	D	D	K	S	L	S	E	V	L	H	Q	V
Query Conservation																						.
Alig confidence						.																.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation						.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		M	Q	S	G	.	L	L	I	L	A	G	P	S	K	S	F	K	S	N	F	G	L	T	M	V	S	S	Y	M	R	Q	Y	P	D	A	V	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	D	S	E	F	G	I	T	P	A	Y	L	R	S	M	.	.	G	V
Template Known Secondary structure				S		.								S	S	S	S																	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S											T	.	.	T
Template Predicted Secondary structure						.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		51	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.		.	.	.	.	.	.	.	.	500	.	.	.			.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.						.	.	.	.	.	.	.	.	540
Predicted Secondary structure																									.													.	.																													.	.	.	.	.
Query SS confidence																									.													.	.																													.	.	.	.	.
Query Sequence		G	L	G	K	L	A	A	R	I	H	D	H	D	R	W	G	D	I	L	S	S	G	E	.	K	Q	R	I	A	L	A	R	L	I	L	R	.	.	R	P	K	W	I	F	L	D	E	T	T	S	H	L	E	E	Q	E	A	I	R	L	L	R	L	V	R	E	.	.	.	.	.	K	L	P	T	S	G	V	I	M
Query Conservation																									.													.	.																													.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.					.													.	.																													.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		D	P	E	R	V	I	H	T	P	V	Q	.	.	.	.	.	.	.	.	S	L	E	Q	L	R	I	D	M	V	N	Q	L	D	A	I	E	R	G	E	K	V	V	V	F	I	D	S	L	G	N	L	A	S	K	T	R	A	K	T	M	K	S	L	F	R	I	V	T	P	Y	F	S	T	K	N	I	P	C	I	A
Template Known Secondary structure			G	G	G							S	.	.	.	.	.	.	.	.	B														T			T	T										S	T	T		B																						T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		541	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		193	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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