Job Description P31826 Confidence 96.04% Date Thu Jan 5 11:48:49 GMT 2012 Rank 222 Aligned Residues 119 % Identity 21% Template c3hr8A_ PDB info PDB header:recombination Chain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca Resolution 1.95 Å

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		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	D	S	W	Y	V	S	Q	T	P	L	I	K	T	G	L	L	K	E	I	I	C	K	A	L	P	L	P	V	D	D	K	S	L	S	E	V	L	H	Q	V	G
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		Y	P	R	G	R	I	V	E	I	F	G	Q	E	S	S	G	K	T	T	L	A	L	H	A	I	A	E	A	Q	K	M	G	G	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	I	D	A	E	H	A	L	D	P	V	Y	A	K	N	L	.	.	G	V	D
Template Known Secondary structure				T	T								S	T	T	S	S															T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S												.	.	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.			.	.	.	.	.	.	510	.														.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																																				.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	K	L	A	A	R	I	H	D	H	D	R	W	G	D	I	L	S	S	G	E	K	Q	R	I	A	L	A	R	L	I	L	R	.	.	R	P	K	W	I	F	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	T	S	H	L	E	E	Q	E	A	I	R	L	L	R	L	V	R	E	K	L	P
Query Conservation																																				.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.												.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	S	L	L	I	S	Q	P	D	H	G	E	.	.	.	.	.	.	.	.	.	.	Q	A	L	E	I	V	D	E	L	V	R	S	G	V	V	D	L	I	V	V	D	S	V	A	A	L	V	P	R	A	E	I	E	G	A	M	G	D	M	Q	V	G	L	Q	A	R	L	M	S	Q	A	L	R	K	I	A	G
Template Known Secondary structure		G	G	G							S	S			.	.	.	.	.	.	.	.	.	.												T	S			S							T	T	T								T	T				S	S		S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
							535	.	.	.	.	540	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	T	S	G	V	I	M	V	T	H
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		S	V	N	K	S	K	A	V	V	I	F	T	N	Q
Template Known Secondary structure					T	S	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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