Return to main results Retrieve Phyre Job Id

Job DescriptionP31826
Confidence96.49%DateThu Jan 5 11:48:49 GMT 2012
Rank179Aligned Residues107
% Identity24%Templatec3ec2A_
PDB info PDB header:replicationChain: A: PDB Molecule:dna replication protein dnac; PDBTitle: crystal structure of the dnac helicase loader
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   387..390.........400.........410.........420.........430.........440.........450.........460......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  NFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLH
Query Conservation 

 
  
   



 








  
 
      
 
        
 
   

  

 


                
 
Alig confidence 





































............





























Template Conservation           


 







 

 


  
       ............                              
Template Sequence  NFNPEEGKGLTFVGSPGVGKTHLAVATLKAIYEKKGIR. . . . . . . . . . . . GYFFDTKDLIFRLKHLXDEGKDTKFLKTVL
Template Known Secondary structure  S

GGG



SSSSSS


............

T

S
Template Predicted Secondary structure 
















............




Template SS confidence 















































































   73......80.........90.........100.........110 .........120.........130.........140
 
   467..470.........480.........490.........500.........510.... .....520.........530.........540..
Predicted Secondary structure 


















.








Query SS confidence 















































.



























Query Sequence  QVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWIFLDETT. SHLEEQEAIRLLRLVREKLPTSGVIMVT
Query Conservation     
      
      
  








 




     





 
.
 

      
   
       


 

Alig confidence  .....................................










.



























Template Conservation  .....................................    




             
  
           
 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NSPVLVLDDLGSERLSDWQRELISYIITYRYNNLKSTIIT
Template Known Secondary structure  .....................................T
ST
SSS


TT
Template Predicted Secondary structure  .....................................














Template SS confidence 












































































   141........150.........160.........170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions