Job Description P31826 Confidence 96.91% Date Thu Jan 5 11:48:49 GMT 2012 Rank 136 Aligned Residues 128 % Identity 16% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	N	F	H	V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	D	S	W	Y	V	S	Q	T	P	L	I	K	T	G	L	L	K	E	I	I	C	K	A	L	P	L	P	V	D	D	K	S	L	S	E	V
Query Conservation
Alig confidence																																			.					.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.					.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	.	K	N	E	G	.	.	.	.	.	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	L	E	I	W
Template Known Secondary structure		S					S	S	S										T	T	S														.			T	T	.	.	.	.	.											S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.					.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																.	210	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.							.	.	.	.	.
Predicted Secondary structure																																																				.																			.	.	.	.	.	.
Query SS confidence																																																				.																			.	.	.	.	.	.
Query Sequence		L	H	Q	V	G	L	G	K	L	A	A	R	I	H	D	H	D	R	W	G	D	I	L	S	S	G	E	K	Q	R	I	A	L	A	R	L	I	L	R	R	P	K	W	I	F	L	D	E	T	T	.	S	H	L	E	E	Q	E	A	I	R	L	L	R	L	V	R	E	K	.	.	.	.	.	.	L	P	T	S	G
Query Conservation																																																				.																			.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																																.																			.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		A	E	R	T	G	C	E	I	V	V	.	.	.	.	.	.	.	.	.	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I
Template Known Secondary structure						T						.	.	.	.	.	.	.	.	.																				T	T		S										S	S																		T	T	S	T	T			S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		538	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	M	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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