Job Description P31826 Confidence 97.40% Date Thu Jan 5 11:48:49 GMT 2012 Rank 101 Aligned Residues 153 % Identity 12% Template c2zjbB_ PDB info PDB header:recombination Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	D	S	W	Y	V	S	Q	T	P	L	I	K	T	G	L	L	K	E	I	I	C	K	A	L	P	L	P	V	D	D	K	S	L	S	E	V	L	H	Q	V	G
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	S	M	A	I	T	E	A	F	G	E	F	R	T	G	K	T	Q	L	S	H	T	L	C	V	T	A	Q	L	P	G	A	G	G	Y	P	G	G	K	I	I	F	I	D	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	F	R	P	D	R	L	R	D	I	A	D	R	F	N
Template Known Secondary structure				S	S	S								S	S		T												T	T	S		B	T	T	T	B										S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											G	G	G	G	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.				.	.	.	.	510	.	.	.	.									.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																																						.	.	.										.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																						.	.	.										.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		L	G	K	L	A	A	R	I	H	D	H	D	R	W	G	D	I	L	S	S	G	E	K	Q	R	I	A	L	A	R	L	I	L	R	R	P	.	.	.	K	W	I	F	L	D	E	T	T	.	.	.	.	.	.	.	.	S	H	L	E	E	Q	E	A	I	R	L	L	R	L	V	R	E	K	L	P	.	.	.	.
Query Conservation																																						.	.	.										.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																																						.	.	.										.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		V	D	H	D	A	V	L	D	N	V	L	Y	A	R	A	Y	T	S	E	H	Q	V	E	L	L	D	Y	V	A	A	K	F	H	E	E	A	G	I	F	K	L	L	I	I	D	S	I	M	A	L	F	R	V	D	F	S	G	R	G	E	L	A	E	R	Q	Q	K	L	A	Q	M	L	S	R	L	Q	K	I	S	E
Template Known Secondary structure								T	T	S								S	T	T																S		S	S									S	T							S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
				535	.	.	.	.	540	.	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.										.
Query SS confidence		.	.										.
Query Sequence		.	.	T	S	G	V	I	M	V	T	H	.	Q	P	G	V	W	N	L	A	D	D	I	C	D	I	S	A
Query Conservation		.	.										.
Alig confidence		.	.										.
Template Conservation
Template Sequence		E	Y	N	V	A	V	F	V	T	N	Q	M	G	H	I	L	A	H	A	S	T	T	R	I	S	L	R	K
Template Known Secondary structure			T	T																S	S	S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions