Job Description P31826 Confidence 99.98% Date Thu Jan 5 11:48:49 GMT 2012 Rank 19 Aligned Residues 188 % Identity 24% Template c2yyzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar abc transporter, atp-binding protein; PDBTitle: crystal structure of sugar abc transporter, atp-binding protein Resolution 2.11 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.												430	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	V	Q	V	A	D	A	S	I	R	T	P	D	N	K	I	I	L	E	N	L	N	F	H	V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	D	.	.	.	.	.	.	.	.	.	.	.	S	W	Y	V
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		P	S	I	R	V	V	N	L	K	K	Y	F	.	G	K	V	K	A	V	D	G	V	S	F	E	V	K	D	G	E	F	V	A	L	L	G	P	S	G	C	G	K	T	T	T	L	L	M	L	A	G	I	Y	K	P	T	S	G	E	I	Y	F	D	D	V	L	V	N	D	I	P	P	K	Y	R	E	V	G	M	V
Template Known Secondary structure														.	T	T													T	T								S	T	T	S	S										T	S	S			S							T	T				T	T	S		G	G	G	T	T
Template Predicted Secondary structure														.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		434	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.						.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure									.												.	.	.	.	.
Query SS confidence									.												.	.	.	.	.
Query Sequence		S	Q	T	P	L	I	K	.	T	G	L	L	K	E	I	I	C	K	A	.	.	.	.	.	L	P	L	P	V	D	D	K	S	L	S	E	V	L	H	Q	V	G	L	G	K	L	A	A	R	I	H	D	H	D	R	W	G	D	I	L	S	S	G	E	K	Q	R	I	A	L	A	R	L	I	L	R	R	P	K	W
Query Conservation									.												.	.	.	.	.
Alig confidence									.												.	.	.	.	.																													.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		F	Q	N	Y	A	L	Y	P	H	M	T	V	F	E	N	I	A	F	P	L	R	A	R	R	I	S	K	D	E	V	E	K	R	V	V	E	I	A	R	K	L	L	I	D	N	L	L	D	R	K	P	T	.	.	.	.	.	.	Q	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	V	K	Q	P	K	V
Template Known Secondary structure			S	S					T	T	S								G	G	G	S	S	S		S					T	T										T	T		G	G	G	T	T	S		G	G	.	.	.	.	.	.	G	S															T	T			S
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.			.	.	.	.	.	540	.	.	.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.															.
Query SS confidence																													.	.															.
Query Sequence		I	F	L	D	E	T	T	S	H	L	E	E	Q	E	A	I	R	L	L	R	L	V	R	E	K	L	P	.	.	T	S	G	V	I	M	V	T	H	Q	P	G	V	W	.	N	L	A	D	D	I	C	D	I	S	A
Query Conservation																													.	.															.
Alig confidence																													.	.															.
Template Conservation
Template Sequence		L	L	F	D	E	P	L	S	N	L	D	A	N	L	R	M	I	M	R	A	E	I	K	H	L	Q	Q	E	L	G	I	T	S	V	Y	V	T	H	D	Q	A	E	A	M	T	M	A	S	R	I	A	V	F	N	Q
Template Known Secondary structure						S	T	T	T	T	S																												S										S							T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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