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Job DescriptionP31826
Confidence99.98%DateThu Jan 5 11:48:49 GMT 2012
Rank19Aligned Residues188
% Identity24%Templatec2yyzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar abc transporter, atp-binding protein; PDBTitle: crystal structure of sugar abc transporter, atp-binding protein
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420......... 430...
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Query Sequence  HAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPAD. . . . . . . . . . . SWYV
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Template Sequence  PSIRVVNLKKYF. GKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYREVGMV
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   2.......10... ......20.........30.........40.........50.........60.........70.........80
 
   434.....440 .........450. ........460.........470.........480.........490.........500.......
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Query Sequence  SQTPLIK. TGLLKEIICKA. . . . . LPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKW
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Template Sequence  FQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPT. . . . . . QLSGGQQQRVALARALVKQPKV
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   81........90.........100.........110.........120.........130.. .......140.........150....
 
   508.510.........520.........530.... .....540........ .550.........
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Query Sequence  IFLDETTSHLEEQEAIRLLRLVREKLP. . TSGVIMVTHQPGVW. NLADDICDISA
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Template Sequence  LLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQ
Template Known Secondary structure  STTTTS


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   155....160.........170.........180.........190.........200.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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