Job Description P31826 Confidence 99.97% Date Thu Jan 5 11:48:49 GMT 2012 Rank 39 Aligned Residues 182 % Identity 17% Template c2r6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:excinuclease abc subunit a; PDBTitle: crystal structure of bacillus stearothermophilus uvra Resolution 3.20 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.										.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.
Query Sequence		T	P	D	N	K	I	I	L	E	N	L	N	F	H	V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	D	S	W	.	.	.	.	.	.	.	.	.	Y	V	S	Q	T	P	L	I	K	T	G	L	L	K	E
Query Conservation																																																										.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	D	I	R	D	V	F	A	S	T	N	E	A	K	V	R	G	Y	K	K	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	H	G	D	G	I	I	K	I	E	X	H	F	L	P	D	V	Y	V	P	C	E	V	C	H	G	K	R	Y	N	R	E	T	L	E	V	T	Y	K	G	K	N	I	A	E
Template Known Secondary structure											T	S						T	T			T	T	T	T		T	T	S	T	T	T	B		T	T	T	T	T		S							S	S	S								T	T	T	T	T			B		T	T	G	G	G			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.					480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.				.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																										.	.	.
Query SS confidence																																			.	.	.	.																										.	.	.
Query Sequence		I	I	C	K	A	L	P	L	P	V	D	D	K	S	L	S	E	V	L	H	Q	V	G	L	G	K	L	A	A	R	I	H	D	.	.	.	.	H	D	R	W	G	D	I	L	S	S	G	E	K	Q	R	I	A	L	A	R	L	I	L	R	R	.	.	.	P	K	W	I	F	L	D	E	T	T	S	H	L	E	E
Query Conservation																																			.	.	.	.																										.	.	.
Alig confidence									.	.																									.	.	.	.																										.	.	.
Template Conservation									.	.
Template Sequence		V	L	D	X	T	V	E	.	.	D	A	L	D	F	F	A	S	I	P	K	I	K	R	K	L	E	T	L	Y	D	V	G	L	G	Y	X	K	L	G	Q	P	A	T	T	L	S	G	G	E	A	Q	R	V	K	L	A	A	E	L	H	R	R	S	N	G	R	T	L	Y	I	L	D	E	P	T	T	G	L	H	V
Template Known Secondary structure				T	S	B			.	.						T		S														T	T		S	S	S	B	T	T			G	G	G																S	S				S									T	T	T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		784	.	.	.	.	.	790			.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
		520	.	.	.	.	.	.	.	.	.	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.							.	.
Predicted Secondary structure														.																											.	.	.	.	.	.
Query SS confidence														.																											.	.	.	.	.	.
Query Sequence		Q	E	A	I	R	L	L	R	L	V	R	E	.	K	L	P	T	S	G	V	I	M	V	T	H	Q	P	G	V	W	N	L	A	D	D	I	C	D	I	.	.	.	.	.	.	S	A
Query Conservation														.																											.	.	.	.	.	.
Alig confidence														.																											.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	I	A	R	L	L	D	V	L	H	R	L	V	D	N	G	D	T	V	L	V	I	E	H	N	L	D	V	I	K	T	A	D	Y	I	I	D	L	G	P	E	G	G	D	R	G
Template Known Secondary structure																	T	T														T	T		S							S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		862	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions