Job Description P31826 Confidence 99.97% Date Thu Jan 5 11:48:49 GMT 2012 Rank 27 Aligned Residues 186 % Identity 24% Template c2pcjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5 Resolution 1.70 Å

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		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.																		.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	V	A	D	A	S	I	R	T	P	D	N	K	I	I	L	E	N	L	N	F	H	V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		L	R	A	E	N	I	K	K	V	I	.	R	G	Y	E	I	L	K	G	I	S	L	S	V	K	K	G	E	F	V	S	I	I	G	A	S	G	S	G	K	S	T	L	L	Y	I	L	G	L	L	D	A	P	T	E	G	K	V	F	L	E	G	K	E	V	D	Y	T	N	E	K	E	L	S	L	L	R	N	R	K
Template Known Secondary structure												.	T	T													T	T									T	T	S										T	T	S	S			S							T	T					T	T
Template Predicted Secondary structure												.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450						.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure															.									.	.	.	.	.
Query SS confidence															.									.	.	.	.	.
Query Sequence		S	W	Y	V	S	Q	T	P	L	I	K	T	G	.	L	L	K	E	I	I	C	K	.	.	.	.	.	A	L	P	L	P	V	D	D	K	S	L	S	E	V	L	H	Q	V	G	L	G	K	L	A	A	R	I	H	D	H	D	R	W	G	D	I	L	S	S	G	E	K	Q	R	I	A	L	A	R	L	I	L	R
Query Conservation															.									.	.	.	.	.
Alig confidence															.									.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		L	G	F	V	F	Q	F	H	Y	L	I	P	E	L	T	A	L	E	N	V	I	V	P	M	L	K	M	G	K	P	K	K	E	A	K	E	R	G	E	Y	L	L	S	E	L	G	L	G	D	K	L	S	R	K	.	.	.	.	.	.	P	Y	E	L	S	G	G	E	Q	Q	R	V	A	I	A	R	A	L	A	N
Template Known Secondary structure							S	S					T	T	S													T	T																	T	T		T	T		T	T			.	.	.	.	.	.	G	G	G	S															T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.		.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		R	P	K	W	I	F	L	D	E	T	T	S	H	L	E	E	Q	E	A	I	R	L	L	R	L	V	R	E	K	L	P	.	T	S	G	V	I	M	V	T	H	Q	P	G	V	W	N	L	A	D	D	I	C	D	I	S	A
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		E	P	I	L	L	F	A	D	E	P	T	G	N	L	D	S	A	N	T	K	R	V	M	D	I	F	L	K	I	N	E	G	G	T	S	I	V	M	V	T	H	E	R	E	L	A	E	L	T	H	R	T	L	E	M	K	D
Template Known Secondary structure				S						S	T	T	T	T	S																		T	T								S						T	T	S	S							T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions