Job Description P31826 Confidence 100.00% Date Thu Jan 5 11:48:49 GMT 2012 Rank 7 Aligned Residues 502 % Identity 11% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		I	I	I	L	A	M	I	L	G	V	V	K	I	Q	V	W	L	N	D	W	N	N	D	F	F	N	A	L	S	Q	K	E	.	T	D	K	L	W	Q	L	V	L	W	F	P	A	L	L	G	I	F	V	L	I	S	V	N	K	T	W	L	I	K	L	L	T	I	R	W	R	E	W	L	T	D	Y	Y	L	N	R
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		A	S	E	T	L	I	S	I	V	N	A	V	N	P	V	A	I	K	A	L	L	P	H	L	T	N	A	I	V	E	T	N	K	W	Q	E	K	I	A	I	L	A	A	F	S	A	X	V	D	A	A	K	D	Q	V	A	L	R	X	P	E	L	I	P	V	L	S	E	T	X	W	D	T	K	K	E	V	K	A	A
Template Known Secondary structure													S		G	G	G																																			S																			T	T		S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		115	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		W	F	A	.	D	K	N	Y	Y	F	T	Q	I	Y	G	E	H	K	N	T	D	N	P	D	Q	R	I	A	E	D	I	L	L	L	I	S	K	T	L	S	L	S	F	G	F	I	Q	S	L	S	M	L	I	T	F	T	V	I	L	W	E	S	A	G	T	L	S	F	T	V	G	G	T	E	W	N	I	Q	G	Y
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		A	T	A	A	X	T	K	A	T	E	T	V	D	N	K	D	I	E	R	F	I	P	S	L	I	Q	C	I	A	D	P	T	E	V	P	E	T	V	H	L	L	G	A	T	T	F	V	A	E	V	T	P	A	T	L	S	I	X	V	P	L	L	S	R	G	L	N	E	R	E	T	G	I	K	R	K	S	A	V	I
Template Known Secondary structure										G	G	G			S	S	T	T	G	G	G											G	G	G									T	T					S																			T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	Y	T	V	V	L	I	V	I	G	G	T	L	F	T	H	K	V	G	K	R	I	R	P	L	N	V	E	K	Q	R	S	E	A	T	F	R	T	N	L	V	Q	H	N	K	Q	A	E	L	I	A	L	S	N	A	E	S	L	Q	R	Q	E	L	S	D	N	F	H	T	I	K	E	N	W	H	R	L	M	N
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		I	D	N	X	C	K	L	V	E	D	P	Q	V	I	A	P	F	L	G	K	L	L	P	G	L	K	S	N	F	A	T	I	A	D	P	E	A	R	E	V	T	L	R	A	L	K	T	L	R	R	V	G	N	V	G	E	D	D	A	I	P	E	L	S	H	A	G	D	V	S	T	T	L	Q	V	V	N	E	.	.
Template Known Secondary structure							T	T												T	T	T																															T	T			G	G	G								T	T												.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	R	W	L	D	Y	W	Q	N	I	Y	S	R	S	L	S	V	L	P	Y	F	L	L	L	P	Q	F	I	S	G	Q	I	N	L	G	G	L	M	K	S	R	Q	A	F	M	L	V	S	N	N	L	S	W	F	I	Y	K	Y	D	E	L	A	E	L	A	A	V	I	D	R	L	Y	E	F	H	Q	L	T	E
Query Conservation
Alig confidence		.	.																																																																		.	.	.	.	.	.	.	.
Template Conservation		.	.																																																																		.	.	.	.	.	.	.	.
Template Sequence		.	.	L	L	K	D	E	T	V	A	P	R	F	K	I	V	V	E	Y	I	A	A	I	G	A	D	L	I	D	E	R	I	I	D	Q	Q	A	W	F	T	H	I	T	P	Y	X	T	I	F	L	H	E	K	K	A	K	D	I	L	D	E	F	R	K	R	A	V	.	.	.	.	.	.	.	.	D	N	I	P	V
Template Known Secondary structure		.	.		T	T	T	S				G	G	G																	T	T			S								T					T	T	T	S																		.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure		.	.																																																																		.	.	.	.	.	.	.	.
Template SS confidence
				347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.									.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	P	T	N	K	P	K	N	C	Q	H	A	V	Q	V	A	D	A	S	I	R	T	P	D	N	K	I	I	L	E	N	L	N	F	H	V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	D	S	W	Y	V
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		G	P	N	F	D	D	E	E	D	E	G	E	D	L	C	N	C	E	F	S	L	A	Y	.	G	A	K	I	L	L	N	K	T	Q	L	R	L	K	R	A	R	R	Y	G	I	C	G	P	N	G	C	G	K	S	T	L	X	R	A	I	A	N	G	Q	V	D	G	F	P	T	Q	E	E	C	R	T	V	Y	V	E
Template Known Secondary structure								T	T	S	S														.	T	T													T	T								S	T	T	S	S										T	T		S	T	T				T	T	T	S					T	T
Template Predicted Secondary structure																									.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		434	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		S	Q	.	T	P	L	I	K	T	G	L	L	K	E	I	I	C	K	A	L	P	L	P	V	D	D	K	S	L	S	E	V	L	H	Q	V	G	L	G	K	L	A	A	R	I	H	D	H	D	R	W	G	D	I	L	S	S	G	E	K	Q	R	I	A	L	A	R	L	I	L	R	R	P	K	W	I	F	L	D	E
Query Conservation				.
Alig confidence				.																			.	.																								.	.	.	.	.
Template Conservation																							.	.																								.	.	.	.	.
Template Sequence		H	D	I	D	G	T	H	S	D	T	S	V	L	D	F	V	F	E	S	G	V	.	.	G	T	K	E	A	I	K	D	K	L	I	E	F	G	F	T	D	E	X	I	A	X	P	.	.	.	.	.	I	S	A	L	S	G	G	W	K	X	K	L	A	L	A	R	A	V	L	R	N	A	D	I	L	L	L	D	E
Template Known Secondary structure									T	T	S	B							T	T			.	.	S													T								S	B	.	.	.	.	.	G	G	G																	T	T		S						S
Template Predicted Secondary structure																							.	.																								.	.	.	.	.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.			.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.						540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		T	T	S	H	L	E	E	Q	E	A	I	R	L	L	R	L	V	R	E	K	L	P	T	S	G	V	I	M	V	T	H	Q	P	G	V	W	N	L	.	A	D	D	I	C	D	I	S	A
Query Conservation																																								.
Alig confidence																						.	.																	.
Template Conservation																						.	.
Template Sequence		P	T	N	H	L	D	T	V	N	V	A	W	L	V	N	Y	L	N	T	C	.	.	G	I	T	S	I	T	I	S	H	D	S	V	F	L	D	N	V	C	E	Y	I	I	N	Y	E	G
Template Known Secondary structure		T	T	T	T																S	.	.		S							S										S							T
Template Predicted Secondary structure																						.	.
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.			.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.