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Job DescriptionP31826
Confidence99.97%DateThu Jan 5 11:48:49 GMT 2012
Rank29Aligned Residues190
% Identity27%Templatec2d62A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   363......370.........380.........390.........400.........410.........420.........430.
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Query Sequence  CQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSW. . . . . . . . . . .
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Template Sequence  GXAEVKLINIWKRF. GDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRXIAGLEEPTRGQIYIEDNLVADPEKGVFVPP
Template Known Secondary structure  S

S.TT
TT

STTSSTSS

STTGGGT

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   3......10...... ...20.........30.........40.........50.........60.........70.........80.
 
   432.......440 .........450. ........460.........470.........480.........490.........
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Query Sequence  . . . . . . YVSQTPLIK. TGLLKEIICKA. . . . . LPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALAR
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Template Sequence  KERDVAXVFQSYALYPHXTVYDNIAFPLKLRKVPKQEIDKRVREVAEXLGLTELLNRK. . . . . . PRELSGGQRQRVALGR
Template Known Secondary structure  T


S



TTS
TTT

TT
GGGTT

......GGGS
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   82.......90.........100.........110.........120.........130......... 140.........150.....
 
   500.........510.........520.........530.... .....540..... ....550.........
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Query Sequence  LILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLP. . TSGVIMVTHQP. GVWNLADDICDISA
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Template Sequence  AIIRRPKVFLXDEPLSNLDAKLRVKXRAELKKLQRQLGVTTIYVTHDQVEAXTXGDRIAVXNK
Template Known Secondary structure  SS

SSTTTT

T
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ST
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   156...160.........170.........180.........190.........200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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