Job Description P31826 Confidence 96.03% Date Thu Jan 5 11:48:49 GMT 2012 Rank 223 Aligned Residues 107 % Identity 21% Template c1sxjE_ PDB info
PDB header: replicationChain: E: PDB Molecule: activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
391 . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470
Predicted Secondary structure
Query SS confidence
Query Sequence
S P G K W L L L K G Y S G A G K T T L L K T L S H C W P W F K G D I S S P A D S W Y V S Q T P L I K T G L L K E I I C K A L P L P V D D K S L S E V L H Q V G L
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
R D L P H L L L Y G P N G T G K K T R C M A L L E S I F G P G V Y R N V V S S P Y H L E I T P S N D R I V I Q E L L K E V A Q M .
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Template Known Secondary structure
T S T T S S T S T T S S T T T . . . . . . . . . . . . . . . .
Template Predicted Secondary structure
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Template SS confidence
34 . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . .
471 . . . . . . . . 480 . . . . . . . . . 490 . . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
G K L A A R I H D H D R W G D I L S S G E K Q R I A L A R L I L R R P K W I F L D E T T S H L E E Q E A I R L L R L V R E K L P T S G V I M V T H Q P
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
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E Q R Y K C V I I N E A N S .
L T K D A Q A A L R R T M E K Y S K N I R L I M V C D S M
Template Known Secondary structure
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Template Predicted Secondary structure
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Template SS confidence
120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
