Job Description P31826 Confidence 99.98% Date Thu Jan 5 11:48:49 GMT 2012 Rank 22 Aligned Residues 188 % Identity 26% Template c1oxtB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter, atp binding protein; PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		366	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure														.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	Q	V	A	D	A	S	I	R	T	P	.	D	N	K	I	I	L	E	N	L	N	F	H	V	S	P	G	K	W	L	L	L	K	G	Y	S	G	A	G	K	T	T	L	L	K	T	L	S	H	C	W	P	W	F	K	G	D	I	S	S	P	A	D	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	I	V	K	N	V	S	K	V	F	K	K	G	K	V	V	A	L	D	N	V	N	I	N	I	E	N	G	E	R	F	G	I	L	G	P	S	G	A	G	K	T	T	F	M	R	I	I	A	G	L	D	V	P	S	T	G	E	L	Y	F	D	D	R	L	V	A	S	N	G	K	L	I	V	P	P	E	D	R
Template Known Secondary structure													G	G	G	T													T	T									T	T	S	S										T	S	S			S							T	T						T	T			S	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
					432	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.	.	.	.	.	.	.						.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure		.	.	.												.																.	.	.	.	.
Query SS confidence		.	.	.												.																.	.	.	.	.
Query Sequence		.	.	.	Y	V	S	Q	T	P	L	I	K	T	G	.	L	L	K	E	I	I	C	K	A	L	P	L	P	V	D	.	.	.	.	.	D	K	S	L	S	E	V	L	H	Q	V	G	L	G	K	L	A	A	R	I	H	D	H	D	R	W	G	D	I	L	S	S	G	E	K	Q	R	I	A	L	A	R	L	I	L
Query Conservation		.	.	.												.																.	.	.	.	.
Alig confidence		.	.	.												.																.	.	.	.	.																							.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		K	I	G	M	V	F	Q	T	W	A	L	Y	P	N	L	T	A	F	E	N	I	A	F	P	L	T	N	M	K	M	S	K	E	E	I	R	K	R	V	E	E	V	A	K	I	L	D	I	H	H	V	L	N	H	F	P	R	.	.	.	.	.	.	E	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	V
Template Known Secondary structure								T	T					T	T	S								G	G	G	T	T	S	S																	T	T		G	G	G	T	T	S		G	G	.	.	.	.	.	.	G	S															T
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.			.	.	.	.	.	540	.	.	.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.															.
Query SS confidence																																		.	.															.
Query Sequence		R	R	P	K	W	I	F	L	D	E	T	T	S	H	L	E	E	Q	E	A	I	R	L	L	R	L	V	R	E	K	L	P	.	.	T	S	G	V	I	M	V	T	H	Q	P	G	V	W	.	N	L	A	D	D	I	C	D	I	S	A
Query Conservation																																		.	.															.
Alig confidence																																		.	.															.
Template Conservation
Template Sequence		K	D	P	S	L	L	L	L	D	E	P	F	S	N	L	D	A	R	M	R	D	S	A	R	A	L	V	K	E	V	Q	S	R	L	G	V	T	L	L	V	V	S	H	D	P	A	D	I	F	A	I	A	D	R	V	G	V	L	V	K
Template Known Secondary structure		T			S						S	S	S	S	S	S																												S										S							T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions