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Job DescriptionP31826
Confidence95.03%DateThu Jan 5 11:48:49 GMT 2012
Rank354Aligned Residues137
% Identity13%Templatec1jr3E_
PDB info PDB header:transferaseChain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410.........420.........430.........440.........450.........460.........470
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Query Sequence  SPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGL
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Template Sequence  RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHC. . . . . . . . . . . . . RGCQLMQAGTHPD. . . . . . . . . . . . .
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   22.......30.........40.........50.........60.. .......70.....
 
   471........480.........490.........500..... ....510.........520.........530.........540.....
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Query Sequence  GKLAARIHDHDRWGDILSSGEKQRIALARLILRRP. . . . . KWIFLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQP
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Template Sequence  . . . . . . YYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAAL. LTDAAANALLKTLEEPPAETWFFLATREP
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   76...80.........90.........100.........110......... 120.........130.........140........
 
   546 ...550.........560
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Query Sequence  G. . . . VWNLADDICDISAV
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Template Sequence  ERLLATLRSRCRLHYLAPP
Template Known Secondary structure  TTS
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   149150.........160.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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