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Job DescriptionP31826
Confidence97.58%DateThu Jan 5 11:48:49 GMT 2012
Rank95Aligned Residues196
% Identity17%Templatec1ewqA_
PDB info PDB header:replication/dnaChain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   315....320.........330.........340.........350.........360.........370... ......380.........390..
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Query Sequence  RQAFMLVSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVADAS. . IRTPDNKIILENLNFHVSP
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Template Sequence  EEVFLEVRERAKRQAEALREAARILAELDVYAALAEVAVRYGYVRPRFGDR. LQIRAGRHPVVERRTEFVPNDLEXA. . .
Template Known Secondary structure  TTT
B

SSS.

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   500.........510.........520.........530.........540.........550 .........560.........570.....
 
   393......400.........410.........420.........430.........440.........450.........460.........470..
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Query Sequence  GKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGK
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Template Sequence  HELVLITGPNXAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYT. . . . . . . RIGA. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
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   576...580.........590.........600.........610.........620.... ....
 
   473......480.........490.........500.........510.........520.........530.. .......540.........550
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Query Sequence  LAARIHDHDRWGDILSSGEKQRIALARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREK. . LPTSGVIMVTHQPGVWNL
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Template Sequence  . . . . . . . . . . . GKSTFXVEXEEVALILKEATENSLVLLDEVGRGTSSLDGVAIATAVAEALHERRAYTLFATHYFELTAL
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   635....640.........650.........660.........670.........680.........690.........700...
 
   551.
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Query Sequence  AD
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Template Sequence  GL
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   704.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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