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Job DescriptionP76052
Confidence99.62%DateThu Jan 5 12:17:52 GMT 2012
Rank53Aligned Residues244
% Identity20%Templated1vixa1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30..... ....40.........50... ......60......... 70.........80
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Query Sequence  RQRYTDIADQIWDHPETRFE. . . . . . . . . . EFWSAEHLASALESAGFT. VTRNVGNIPNAFIASF. . . . GQGKPVIALLG
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Template Sequence  LDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGLINVTLSEKG. . . TLMATLPANVPGDIPAIGFIS
Template Known Secondary structure  S

B

SS
SSSSSSTTTT

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   1........10.........20.........30.........40.........50...... ...60.........70.......
 
   81........90. ........100.........110.. .......120.........130
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Query Sequence  EYDALAGLSQQ. . . . . . . . . . . . . . . . . . . . . . . . . . AGCAQPTSVTPGENGHGCGHN. . . . LLGTAAFAAAIAVKKWLE
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Template Sequence  HVDTSPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQ
Template Known Secondary structure 

B
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S

SS
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GGGGG
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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  QYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSA
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Template Sequence  KKIPHGDIRVAFTPDEEVGKGAKHFDVDAF. . DARWAYTVDGGGVG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT




S
GGGT
TTTT

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   158.160.........170.........180....... ..190.........200.
 
   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  LDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . E
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   291.. ......300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  CRF. DKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQATLTSNDRQNSLNNIAATGGENGKVFALRHRETVL
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Template Sequence  LEFENNMREKVVEHPHILDIAQQAMRDCDIEP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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TSTTT


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   203......210.........220.........230....
 
   370.........380.........390..... ....400.........410.........420.........430.........440....
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Query Sequence  ANEVAPYAATDNVLAASTDVGDVSWK. LPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNL
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Template Sequence  . . . . . . . . . ELKPIRGGTDGAQLSFMGLPCPNLFTGGYN. . . . YHGKHE. . . . . . FVTLEGMEKAVQVIVRIAELT
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   348.350.........360.........370....... ..380... ......390.........400....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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