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Job DescriptionP76052
Confidence99.54%DateThu Jan 5 12:17:52 GMT 2012
Rank56Aligned Residues244
% Identity18%Templated1fnoa4
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QRYTDIADQIWDHPETRFE. . . . . . . . . . EFWSAEHLASALESAGFT. VTRNVGNIPNAFIASF. . . . GQGKPVIALLGE
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Template Sequence  DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEXGLVNITLSEKG. . . TLXATLPANVEGDIPAIGFISH
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STS

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   2.......10.........20.........30.........40.........50...... ...60.........70........
 
   82.......90..... ....100.........110.. .......120.........130.
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Query Sequence  YDALAGLSQQAGCA. . . . . . . . . . . . . . . . . . . . . . . . . . QPTSVTPGENGHGCGHN. . . . LLGTAAFAAAIAVKKWLEQ
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Template Sequence  VDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVXFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIXTALAVLKGN
Template Known Secondary structure 

B
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GGGGG
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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   132.......140.........150.........160.........170.........180.........190.........200.........210.
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Query Sequence  YGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSAL
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Template Sequence  PIPHGDIKVAFTPDEEVGKGAKHFDVEAF. . GAQWAYTVDGGGVGELEFENNXRE. . . . . . . . . . . . . . . . . . . . . . . . .
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   159160.........170.........180....... ..190.........200.........210.
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  DAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVEC
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   292.......300.........310.........320.........330.........340.........350.........360.........370.
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Query Sequence  RFDKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQATLTSNDRQNSLNNIAATGGENGKVFALRHRETVLAN
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Template Sequence  . . . . . . . KVVEHPHILDIAQQAXRDCHITP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .......TSTTT


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   372.......380.........390..... ....400.........410.........420.........430.........440....
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Query Sequence  EVAPYAATDNVLAASTDVGDVSWK. LPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNL
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Template Sequence  . . . . . . . EXKPIRGGTDGAQLSFXGLPCPNLFTGGYN. . . . YHGKHE. . . . . . FVTLEGXEKAVQVIVRIAELT
Template Known Secondary structure  .......B



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   348.350.........360.........370....... ..380... ......390.........400....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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