Job Description P76052 Confidence 100.00% Date Thu Jan 5 12:17:52 GMT 2012 Rank 20 Aligned Residues 348 % Identity 15% Template c3tx8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of a succinyl-diaminopimelate desuccinylase (arge)2 from corynebacterium glutamicum atcc 13032 at 2.97 a resolution Resolution 2.97 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		Q	R	Y	T	D	I	A	D	Q	I	W	D	H	P	E	T	R	F	E	E	F	W	S	A	E	H	L	A	S	A	L	E	S	A	G	F	T	V	T	R	N	V	G	N	I	P	N	A	F	I	A	S	F	G	Q	G	.	K	P	V	I	A	L	L	G	E	Y	D	A	L	A	G	L	S	Q	Q	A	G	C	A
Query Conservation																																																										.
Alig confidence																																										.																.															.	.	.	.	.	.
Template Conservation																																										.																															.	.	.	.	.	.
Template Sequence		G	D	P	I	V	L	T	Q	R	L	V	D	I	P	S	P	S	G	Q	E	K	Q	I	A	D	E	I	E	D	A	L	R	N	L	N	L	P	G	V	E	.	V	F	R	F	N	N	N	V	L	A	R	T	N	R	G	L	A	S	R	V	X	L	A	G	H	I	D	T	V	P	.	.	.	.	.	.	I	A	D
Template Known Secondary structure		S											S	S			B	T	T		T													T	T	T		T	T			.					T	T											S											B	S		.	.	.	.	.	.			S
Template Predicted Secondary structure																																										.																															.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		Q	P	T	S	V	T	P	G	E	N	G	H	G	C	G	H	N	L	L	G	T	A	A	F	A	A	A	I	A	V	K	K	W	L	E	Q	Y	G	Q	G	G	T	V	R	F	Y	G	C	P	G	E	E	G	G	S	.	.	G	K	T	F	M	V	R	E	G	V	F	D	D	V	D	A	A	L	T	W	H	P	E
Query Conservation																																																									.	.
Alig confidence																																																									.	.
Template Conservation
Template Sequence		N	L	P	S	R	V	E	D	G	I	X	Y	G	C	G	T	V	D	X	K	S	G	L	A	V	Y	L	H	T	F	A	T	L	A	T	S	T	E	L	K	H	D	L	T	L	I	A	Y	E	C	E	E	V	A	D	H	L	N	G	L	G	H	I	R	D	E	H	P	E	W	L	A	A	D	L	A	L	L	G	E
Template Known Secondary structure				S					S	S				S	S	S	T	T	T	T															T	S		T	T			S											S	S		T	T	S											G	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		A	F	A	G	M	F	N	T	R	T	L	A	N	I	Q	A	S	W	R	F	K	G	I	A	A	H	A	A	N	S	P	H	L	G	R	S	A	L	D	A	V	T	L	M	T	T	G	T	N	F	L	N	E	H	I	I	E	K	.	.	.	.	.	A	R	V	H	Y	A	I	T	N	S	G	G	I	S	P	N	V
Query Conservation																																																												.	.	.	.	.
Alig confidence																															.																													.	.	.	.	.
Template Conservation																															.
Template Sequence		P	T	G	G	W	I	E	A	G	C	Q	G	N	L	R	I	K	V	T	A	H	G	V	R	A	H	S	A	R	.	S	W	L	G	D	N	A	X	H	K	L	S	P	I	I	S	K	V	A	A	Y	K	A	A	E	V	N	I	D	G	L	T	Y	R	E	G	L	N	I	V	F	C	E	S	G	V	A	N	N	V
Template Known Secondary structure				T	T					S	B													B			B	T	T	S	.	G	G	G	S	B		T	G	G	G	G																		T	T																S	B	T	T	B
Template Predicted Secondary structure																															.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	A	Q	A	E	V	L	Y	L	I	R	A	P	E	M	T	D	V	Q	H	I	Y	D	R	V	A	K	I	A	E	G	A	A	L	M	T	E	T	T	V	E	C	R	F	D	K	A	C	S	S	Y	L	P	N	R	T	L	E	N	A	M	Y	Q	A	L	S	H	F	G	T	P	E	W	N	S	E	E	L	A
Query Conservation
Alig confidence																																					.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	D	L	A	W	X	N	L	N	F	R	F	A	P	N	R	D	L	N	E	A	I	E	H	V	V	E	T	L	E	L	D	G	Q	.	D	G	I	E	W	A	V	E	D	G	A	G	G	A	L	P	G	L	G	Q	Q	V	T	S	G	L	I	D	A	V	G	R	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S												T	T	S													T	T	T	T	T	S	.	T	T												B				T	T	S												G	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		F	A	K	Q	I	Q	A	T	L	T	S	N	D	R	Q	N	S	L	N	N	I	A	A	T	G	G	E	N	G	K	V	F	A	L	R	H	R	E	T	V	L	A	N	E	V	A	P	Y	A	A	T	D	N	V	L	A	A	S	T	D	V	G	D	V	S	W	K	.	L	P	V	A	Q	C	F	S	P	C	F	A
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	I	R	A	K	F	G	W	T	D	V	S	R	F	S	A	X	G	I	P	A	.	.	L	N	F	G	A	G	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G						S			T						T	T	T				.	.					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
																																																			312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	P	L	H	T	W	Q	L	V	S	Q	G	R	T	S	I	A	H	K	G	M	L	L	A	A	K	T	M	A	A	T	T	V	N
Query Conservation
Alig confidence						.						.	.	.	.	.	.
Template Conservation						.						.	.	.	.	.	.
Template Sequence		P	S	F	A	.	H	K	R	D	E	.	.	.	.	.	.	Q	C	P	V	E	Q	I	T	D	V	A	A	I	L	K	Q	Y	L	S	E
Template Known Secondary structure		S	S	S	S	.	S		T	T		.	.	.	.	.	.
Template Predicted Secondary structure						.						.	.	.	.	.	.
Template SS confidence
		341	.	.	.		.	.	.	.	.							350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.